Agile TMS: A multi-locus system for rapid and automatic spatial targeting and mapping

2021 ◽  
Vol 14 (6) ◽  
pp. 1750
Author(s):  
Jaakko Nieminen ◽  
Heikki Sinisalo ◽  
Victor Souza ◽  
Mikko Malmi ◽  
Mikhail Yuryev ◽  
...  
Membranes ◽  
2021 ◽  
Vol 11 (4) ◽  
pp. 299
Author(s):  
Monica De Caroli ◽  
Fabrizio Barozzi ◽  
Luciana Renna ◽  
Gabriella Piro ◽  
Gian-Pietro Di Sansebastiano

Plants rely on both actin and microtubule cytoskeletons to fine-tune sorting and spatial targeting of membranes during cell growth and stress adaptation. Considerable advances have been made in recent years in the comprehension of the relationship between the trans-Golgi network/early endosome (TGN/EE) and cytoskeletons, but studies have mainly focused on the transport to and from the plasma membrane. We address here the relationship of the cytoskeleton with different endoplasmic reticulum (ER) export mechanisms toward vacuoles. These emergent features of the plant endomembrane traffic are explored with an in vivo approach, providing clues on the traffic regulation at different levels beyond known proteins’ functions and interactions. We show how traffic of vacuolar markers, characterized by different vacuolar sorting determinants, diverges at the export from the ER, clearly involving different components of the cytoskeleton.


2012 ◽  
Vol 9 (4) ◽  
pp. 046005 ◽  
Author(s):  
Maureen Keane ◽  
Steve Deyo ◽  
Aviva Abosch ◽  
Jawad A Bajwa ◽  
Matthew D Johnson

Nano Letters ◽  
2017 ◽  
Vol 17 (6) ◽  
pp. 3822-3829 ◽  
Author(s):  
Song Shen ◽  
Hong-Jun Li ◽  
Kai-Ge Chen ◽  
Yu-Cai Wang ◽  
Xian-Zhu Yang ◽  
...  

2018 ◽  
Vol 12 (4) ◽  
pp. 731-744 ◽  
Author(s):  
Petar S. Varbanov ◽  
Timothy G. Walmsley ◽  
Yee V. Fan ◽  
Jiří J. Klemeš ◽  
Simon J. Perry

2018 ◽  
Vol 24 (S1) ◽  
pp. 2312-2313 ◽  
Author(s):  
Matthew S. Joens ◽  
Daniel J. Geanon ◽  
Peter O. Bayguinov ◽  
Kory J. Lavine ◽  
James A.J. Fitzpatrick

2016 ◽  
Author(s):  
Mehdi Maadooliat ◽  
Naveen K. Bansal ◽  
Jiblal Upadhya ◽  
Manzur R. Farazi ◽  
Zhan Ye ◽  
...  

AbstractSeveral important and fundamental aspects of disease genetics models have yet to be described. One such property is the relationship of disease association statistics at a marker site closely linked to a disease causing site. A complete description of this two-locus system is of particular importance to experimental efforts to fine map association signals for complex diseases. Here, we present a simple relationship between disease association statistics and the decline of linkage disequilibrium from a causal site. A complete derivation of this relationship from a general disease model is shown for very large sample sizes. Quite interestingly, this relationship holds across all modes of inheritance. Extensive Monte Carlo simulations using a disease genetics model applied to chromosomes subjected to a standard model of recombination are employed to better understand the variation around this fine mapping theorem due to sampling effects. We also use this relationship to provide a framework for estimating properties of a non-interrogated causal site using data at closely linked markers. We anticipate that understanding the patterns of disease association decay with declining linkage disequilibrium from a causal site will enable more powerful fine mapping methods.


Oncotarget ◽  
2010 ◽  
Vol 1 (6) ◽  
pp. 436-446 ◽  
Author(s):  
Lauren Van Der Kraak ◽  
Charles Meunier ◽  
Claire Turbide ◽  
Serge Jothy ◽  
Louis Gaboury ◽  
...  
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