Dielectric response and vibrational energy relaxation in photoactive yellow protein: A molecular dynamics simulation study

Simulation Study ◽

Dielectric Response ◽

Vibrational Energy ◽

Protein A ◽

Energy Relaxation ◽

Dynamics Simulation ◽

Photoactive Yellow Protein ◽

Molecular dynamics simulation of vibrational energy relaxation of highly excited molecules in fluids. I. General considerations

The Journal of Chemical Physics ◽

10.1063/1.478422 ◽

1999 ◽

Vol 110 (11) ◽

pp. 5273-5285 ◽

Cited By ~ 16

Author(s):

V. S. Vikhrenko ◽

C. Heidelbach ◽

D. Schwarzer ◽

V. B. Nemtsov ◽

J. Schroeder

Keyword(s):

Molecular Dynamics ◽

Vibrational Energy ◽

Energy Relaxation ◽

Dynamics Simulation ◽

Vibrational Energy Relaxation ◽

Excited Molecules

Vibrational Energy Relaxation in Liquid Oxygen from a Semiclassical Molecular Dynamics Simulation

The Journal of Physical Chemistry A ◽

10.1021/jp0304982 ◽

2003 ◽

Vol 107 (43) ◽

pp. 9070-9078 ◽

Cited By ~ 66

Author(s):

Qiang Shi ◽

Eitan Geva

Keyword(s):

Molecular Dynamics ◽

Vibrational Energy ◽

Energy Relaxation ◽

Dynamics Simulation ◽

Liquid Oxygen ◽

Molecular dynamics simulation of hydrogen isotope-terminated silicon(111) and (110) surfaces: calculation of vibrational energy relaxation rates of hydrogen isotope stretching modes

Chemical Physics Letters ◽

10.1016/s0009-2614(00)00012-9 ◽

2000 ◽

Vol 318 (1-3) ◽

pp. 7-14 ◽

Cited By ~ 6

Author(s):

Ying-Chieh Sun ◽

Hsiu-Feng Lu ◽

Ming-Shun Ho

Keyword(s):

Molecular Dynamics ◽

Hydrogen Isotope ◽

Vibrational Energy ◽

Energy Relaxation ◽

Dynamics Simulation ◽

Relaxation Rates ◽

Molecular dynamics simulation of vibrational energy relaxation of highly excited molecules in fluids. III. Equilibrium simulations of vibrational energy relaxation of azulene in carbon dioxide

The Journal of Chemical Physics ◽

10.1063/1.480135 ◽

1999 ◽

Vol 111 (17) ◽

pp. 8022-8033 ◽

Cited By ~ 7

Author(s):

C. Heidelbach ◽

V. S. Vikhrenko ◽

D. Schwarzer ◽

I. I. Fedchenia ◽

J. Schroeder

Keyword(s):

Carbon Dioxide ◽

Molecular Dynamics ◽

Vibrational Energy ◽

Energy Relaxation ◽

Dynamics Simulation ◽

Vibrational Energy Relaxation ◽

Excited Molecules

Hydrogen bonding and vibrational energy relaxation of interfacial water: A full DFT molecular dynamics simulation

The Journal of Chemical Physics ◽

10.1063/1.4995437 ◽

2017 ◽

Vol 147 (4) ◽

pp. 044707 ◽

Cited By ~ 10

Author(s):

Jonggu Jeon ◽

Cho-Shuen Hsieh ◽

Yuki Nagata ◽

Mischa Bonn ◽

Minhaeng Cho

Keyword(s):

Molecular Dynamics ◽

Hydrogen Bonding ◽

Vibrational Energy ◽

Energy Relaxation ◽

Dynamics Simulation ◽

Interfacial Water ◽

Molecular Dynamics Simulation of the Vibrational Energy Relaxation of I2 in Nano-confined Argon Solution

Acta Physico-Chimica Sinica ◽

10.3866/pku.whxb20080821 ◽

2008 ◽

Vol 24 (08) ◽

pp. 1451-1458

Author(s):

MAO Rong-Rong ◽

◽

LV Yang ◽

ZHOU Li-Chuan ◽

...

Keyword(s):

Molecular Dynamics ◽

Vibrational Energy ◽

Energy Relaxation ◽

Dynamics Simulation ◽

Molecular dynamics simulation of hydrogen-covered reconstructed Si():H-2×1 silicon surface: calculation of vibrational energy relaxation rates of hydrogen stretching modes

Surface Science ◽

10.1016/s0039-6028(02)02023-x ◽

2002 ◽

Vol 516 (3) ◽

pp. L540-L546 ◽

Cited By ~ 2

Author(s):

Ming-Hsun Ho ◽

Ying-Chieh Sun

Keyword(s):

Molecular Dynamics ◽

Silicon Surface ◽

Vibrational Energy ◽

Energy Relaxation ◽

Dynamics Simulation ◽

Relaxation Rates ◽

Vibrational Energy Relaxation ◽

Surface Calculation

Effect of conjugated (EK)10 peptide on structural and dynamic properties of ubiquitin protein: a molecular dynamics simulation study

Journal of Materials Chemistry B ◽

10.1039/d0tb00664e ◽

2020 ◽

Vol 8 (31) ◽

pp. 6934-6943

Author(s):

Qing Shao

Keyword(s):

Molecular Dynamics ◽

Simulation Study ◽

Dynamic Properties ◽

Protein A ◽

Dynamics Simulation ◽

Allosteric Effect ◽

Peptide Conjugation ◽

The Stability

Peptide conjugation modulates the stability and biological acitivty of proteins via the allosteric effect.

Domain focused and residue focused phosphorylation effect on tau protein: A molecular dynamics simulation study

Journal of the Mechanical Behavior of Biomedical Materials ◽

10.1016/j.jmbbm.2020.104149 ◽

2021 ◽

Vol 113 ◽

pp. 104149

Author(s):

Md Ishak Khan ◽

Fuad Hasan ◽

Khandakar Abu Hasan Al Mahmud ◽

Ashfaq Adnan

Keyword(s):

Molecular Dynamics ◽

Simulation Study ◽

Tau Protein ◽

Protein A ◽

Dynamics Simulation

Assembly of Transmembrane Domains of Human Papillomavirus Type 16 E5 Protein- a Molecular Dynamics Simulation Study

Biophysical Journal ◽

10.1016/j.bpj.2013.11.411 ◽

2014 ◽

Vol 106 (2) ◽

pp. 60a

Author(s):

Dhani R. Mahato ◽

Wolfgang B. Fischer

Keyword(s):

Molecular Dynamics ◽

Human Papillomavirus ◽

Simulation Study ◽

Protein A ◽

Transmembrane Domains ◽

Dynamics Simulation ◽

Human Papillomavirus Type 16 ◽

E5 Protein