A novel de novo heterozygous deletion at 13q14.2-q21.1 in two siblings with mild intellectual disability

Gene Reports ◽  
2018 ◽  
Vol 12 ◽  
pp. 201-207
Author(s):  
Kirti Mittal ◽  
Laxmi Kirola ◽  
Sridevi Hegde ◽  
Mitesh Shetty ◽  
Madhulika Kabra ◽  
...  
2020 ◽  
Vol 63 (9) ◽  
pp. 103972
Author(s):  
Martin A. McClatchey ◽  
Zachary D. du Toit ◽  
Rhys Vaughan ◽  
Sharon D. Whatley ◽  
Sara Martins ◽  
...  

2021 ◽  
Vol 12 ◽  
Author(s):  
Xiucui Li ◽  
Shijia Bao ◽  
Wei Wang ◽  
Xulai Shi ◽  
Ying Hu ◽  
...  

A series of neurological manifestations such as intellectual disability and epilepsy are closely related to hypomagnesemia. Cyclin M2 (CNNM2) proteins, as a member of magnesium (Mg2+) transporters, were found along the basolateral membrane of distal renal tubules and involved in the reabsorption of Mg2+. Homozygous and heterozygous variants in CNNM2 reported so far were responsible for a variable degree of hypomagnesemia, several of which also showed varying degrees of neurological phenotypes such as intellectual disability and epilepsy. Here, we report a de novo heterozygous CNNM2 variant (c.2228C > T, p.Ser743Phe) in a Chinese patient, which is the variant located in the cyclic nucleotide monophosphate-binding homology (CNBH) domain of CNNM2 proteins. The patient presented with mild intellectual disability and refractory epilepsy but without hypomagnesemia. Thus, we reviewed the literature and analyzed the phenotypes related to CNNM2 variants, and then concluded that the number of variant alleles and the changed protein domains correlates with the severity of the disease, and speculated that the CNBH domain of CNNM2 possibly plays a limited role in Mg2+ transport but a significant role in brain development. Furthermore, it can be speculated that neurological phenotypes such as intellectual disability and seizures can be purely caused by CNNM2 variants.


2016 ◽  
Vol 19 (2) ◽  
pp. 85-90 ◽  
Author(s):  
I Görker ◽  
H Gürkan ◽  
S Demir Ulusal ◽  
E Atlı ◽  
E Ikbal Atlı

AbstractPhelan McDermid Syndrome (PHMDS) (OMIM #606232), is a contiguous gene disorder resulting from deletion of the distal long arm of chromosome 22. The 22q13.3 deletions and mutations that lead to a loss of a functional copy of SHANK3 (OMIM *606230) cause the syndrome, characterized by moderate to profound intellectual disability, severely delayed or absent speech, hypotonia, and autism spectrum disorder (ASD) or ASD traits. In this study, we present the case of a 9-year-old girl who had earlier been diagnosed with an ASD. Our findings were a clinically mild intellectual disability, rounded face, pointed chin but no autistic findings. We learned that her neuromotor development was delayed and she had neonatal hypotonia in her history. A heterozygous deletion of MLC1, SBF1, MAPK8IP2, ARSA, SHANK3 and ACR genes, located on 22q13.33, was defined by multiplex ligation-dependent probe amplification (MLPA). Deletion of 22q13.3 (ARSA) region was confirmed by a fluorescent in situ hybridization (FISH) technique. The 22q13.3 deletion was found to be de novo in our patient, and she was diagnosed with PHMDS. We confirmed the 22q13.3 deletion and also determined a gain of 8p23.3-23.2 by array comparative genomic hybridization (aCGH). Fluorescent in situ hybridization was performed to determine whether the deletion was of parental origin and to identify regions of chromosomes where the extra 8p may have been located. The parents were found to be normal. The extra copy of 8p was observed on 22q in the patient. She is the first case reported in association with the 22q deletion of 8p duplications in the literature.


2021 ◽  
pp. 1-7
Author(s):  
Tuğba Karaman Mercan ◽  
Ozden Altiok Clark ◽  
Ozgur Erkal ◽  
Banu Nur ◽  
Ercan Mihci ◽  
...  

Terminal deletions in the long arm of chromosome 4 are an uncommon event, with a worldwide incidence of approximately 0.001%. The majority of these deletions occur de novo. Terminal deletion cases are usually accompanied by clinical findings that include facial and cardiac anomalies, as well as intellectual disability. In this study, we describe the case of a 2-year-old girl, the fourth child born to consanguineous parents. While her karyotype was normal, a homozygous deletion was identified in the chromosome 4q35.2 region by subtelomeric FISH. A heterozygous deletion of the chromosome 4q35.2 region was observed in both parents. According to the literature, this is the first report of a case that has inherited a homozygous deletion of chromosome 4qter from carrier parents. Subsequent array-CGH analyses were performed on both the case and her parents. Whole-exome sequencing was also carried out to determine potential variants. We detected a NM_001111125.3:c.2329G&#x3e;T (p.Glu777Ter) nonsense variant of the <i>IQSEC2</i> gene in the girl, a variant that is related to X-linked intellectual disability.


2012 ◽  
Vol 55 (5) ◽  
pp. 358-361 ◽  
Author(s):  
Willem M.A. Verhoeven ◽  
Jos I.M. Egger ◽  
Ilse Feenstra ◽  
Nicole de Leeuw

2014 ◽  
Vol 57 (9) ◽  
pp. 513-519 ◽  
Author(s):  
Madeleine Fannemel ◽  
Tuva Barøy ◽  
Asbjørn Holmgren ◽  
Olaug K. Rødningen ◽  
Trine M. Haugsand ◽  
...  

2012 ◽  
Vol 55 (12) ◽  
pp. 695-699 ◽  
Author(s):  
Karijn Floor ◽  
Tuva Barøy ◽  
Doriana Misceo ◽  
Øivind J. Kanavin ◽  
Madeleine Fannemel ◽  
...  

2015 ◽  
Vol 97 ◽  
Author(s):  
ZEHRA AGHA ◽  
ZAFAR IQBAL ◽  
TJITSKE KLEEFSTRA ◽  
CHRISTIANE ZWEIER ◽  
ROLPH PFUNDT ◽  
...  

SummaryThis report is regarding a Dutch female with microcephaly, mild intellectual disability (ID), gonadal dysgenesis and dysmorphic facial features with synophrys. Upon genotyping, an ~455 kb de novo deletion encompassing the first exon of NRXN1 was found. Bidirectional sequencing of the coding exons of the NRXN1 alpha isoform was subsequently performed to investigate the possibility of a pathogenic mutation on the other allele, but we could not find any other mutation. Previously, many heterozygous mutations as well as microdeletions in NRXN1 were shown to be associated with ID, autism, schizophrenia, and other psychiatric and psychotic disorders. Our results are in agreement with other reports that show that NRXN1 deletions can lead to ID, microcephaly and mild dysmorphic features. However, this is the first report of gonadal dysgenesis being associated with such deletions. It is not clear whether there is a causal relationship between the NRXN1 deletion and gonadal dysgenesis, but it is of interest that the FSHR gene, which encodes the follicle-stimulating hormone receptor causative correlation that is mutated in ovarian dysgenesis, is located proximal to the NRXN1 gene. Given that most of the females carrying NRXN1 deletions have been diagnosed at a prepubertal age, gynecologic screening of female carriers of a NRXN1 deletion is warranted.


2011 ◽  
Vol 155 (6) ◽  
pp. 1425-1431
Author(s):  
Nicoletta Villa ◽  
Angela Bentivegna ◽  
Adam Ertel ◽  
Serena Redaelli ◽  
Carla Colombo ◽  
...  

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