The modified Mahalanobis Discriminant for predicting outer membrane proteins by using Chou's pseudo amino acid composition

Journal of Theoretical Biology ◽

10.1016/j.jtbi.2008.02.004 ◽

2008 ◽

Vol 252 (2) ◽

pp. 350-356 ◽

Author(s):

Hao Lin

Keyword(s):

Membrane Proteins ◽

Amino Acid Composition ◽

Outer Membrane ◽

Acid Composition ◽

Outer Membrane Proteins ◽

Pseudo Amino Acid Composition

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Improving discrimination of outer membrane proteins by fusing different forms of pseudo amino acid composition

Analytical Biochemistry ◽

10.1016/j.ab.2009.10.040 ◽

2010 ◽

Vol 398 (1) ◽

pp. 52-59 ◽

Author(s):

Qing-Bin Gao ◽

Xiao-Fei Ye ◽

Zhi-Chao Jin ◽

Jia He

Keyword(s):

Membrane Proteins ◽

Amino Acid Composition ◽

Outer Membrane ◽

Acid Composition ◽

Outer Membrane Proteins ◽

Pseudo Amino Acid Composition

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iMem-2LSAAC: A two-level model for discrimination of membrane proteins and their types by extending the notion of SAAC into chou's pseudo amino acid composition

Journal of Theoretical Biology ◽

10.1016/j.jtbi.2018.01.008 ◽

2018 ◽

Vol 442 ◽

pp. 11-21 ◽

Author(s):

Muhammad Arif ◽

Maqsood Hayat ◽

Zahoor Jan

Keyword(s):

Membrane Proteins ◽

Amino Acid Composition ◽

Acid Composition ◽

Pseudo Amino Acid Composition ◽

Level Model ◽

Two Level Model

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A Multilabel Model Based on Chou’s Pseudo–Amino Acid Composition for Identifying Membrane Proteins with Both Single and Multiple Functional Types

The Journal of Membrane Biology ◽

10.1007/s00232-013-9536-9 ◽

2013 ◽

Vol 246 (4) ◽

pp. 327-334 ◽

Author(s):

Chao Huang ◽

Jing-Qi Yuan

Keyword(s):

Membrane Proteins ◽

Amino Acid Composition ◽

Acid Composition ◽

Pseudo Amino Acid Composition ◽

Model Based ◽

Functional Types

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Pseudo Amino Acid Composition and its Applications in Bioinformatics, Proteomics and System Biology

Current Proteomics ◽

10.2174/157016409789973707 ◽

2009 ◽

Vol 6 (4) ◽

pp. 262-274 ◽

Author(s):

Kuo-Chen Chou

Keyword(s):

Amino Acid Composition ◽

Acid Composition ◽

System Biology ◽

Pseudo Amino Acid Composition

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OligoPred: A web-server for predicting homo-oligomeric proteins by incorporating discrete wavelet transform into Chou's pseudo amino acid composition

Journal of Molecular Graphics and Modelling ◽

10.1016/j.jmgm.2011.06.014 ◽

2011 ◽

Vol 30 ◽

pp. 129-134 ◽

Author(s):

Jian-Ding Qiu ◽

Sheng-Bao Suo ◽

Xing-Yu Sun ◽

Shao-Ping Shi ◽

Ru-Ping Liang

Keyword(s):

Wavelet Transform ◽

Discrete Wavelet Transform ◽

Amino Acid Composition ◽

Acid Composition ◽

Discrete Wavelet ◽

Pseudo Amino Acid Composition ◽

Oligomeric Proteins

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Prediction of Aptamer-Target Interacting Pairs with Pseudo-Amino Acid Composition

PLoS ONE ◽

10.1371/journal.pone.0086729 ◽

2014 ◽

Vol 9 (1) ◽

pp. e86729 ◽

Author(s):

Bi-Qing Li ◽

Yu-Chao Zhang ◽

Guo-Hua Huang ◽

Wei-Ren Cui ◽

Ning Zhang ◽

...

Keyword(s):

Amino Acid Composition ◽

Acid Composition ◽

Pseudo Amino Acid Composition

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Predicting protein subnuclear location with optimized evidence-theoretic K-nearest classifier and pseudo amino acid composition

Biochemical and Biophysical Research Communications ◽

10.1016/j.bbrc.2005.09.117 ◽

2005 ◽

Vol 337 (3) ◽

pp. 752-756 ◽

Author(s):

Hong-Bin Shen ◽

Kuo-Chen Chou

Keyword(s):

Amino Acid Composition ◽

Acid Composition ◽

Pseudo Amino Acid Composition

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Using Chou’s Pseudo Amino Acid Composition for Protein Remote Homology Detection

Engineering ◽

10.4236/eng.2013.510b032 ◽

2013 ◽

Vol 05 (10) ◽

pp. 149-153 ◽

Author(s):

Bin Liu ◽

Xiaolong Wang

Keyword(s):

Amino Acid Composition ◽

Acid Composition ◽

Homology Detection ◽

Pseudo Amino Acid Composition ◽

Remote Homology ◽

Remote Homology Detection

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MultiP-SChlo: multi-label protein subchloroplast localization prediction with Chou’s pseudo amino acid composition and a novel multi-label classifier

Bioinformatics ◽

10.1093/bioinformatics/btv212 ◽

2015 ◽

Vol 31 (16) ◽

pp. 2639-2645 ◽

Author(s):

Xiao Wang ◽

Weiwei Zhang ◽

Qiuwen Zhang ◽

Guo-Zheng Li

Keyword(s):

Amino Acid Composition ◽

Acid Composition ◽

Pseudo Amino Acid Composition ◽

Label Protein ◽

Localization Prediction

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Prediction and classification of protein subcellular location-sequence-order effect and pseudo amino acid composition

Journal of Cellular Biochemistry ◽

10.1002/jcb.10719 ◽

2003 ◽

Vol 90 (6) ◽

pp. 1250-1260 ◽

Author(s):

Kuo-Chen Chou ◽

Yu-Dong Cai

Keyword(s):

Amino Acid Composition ◽

Acid Composition ◽

Subcellular Location ◽

Order Effect ◽

Pseudo Amino Acid Composition ◽

Protein Subcellular Location

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