Investigation of useful carbon tracers for 13 C-metabolic flux analysis of Escherichia coli by considering five experimentally determined flux distributions

Metabolic Engineering Communications ◽

10.1016/j.meteno.2016.06.001 ◽

2016 ◽

Vol 3 ◽

pp. 187-195 ◽

Author(s):

Kousuke Maeda ◽

Nobuyuki Okahashi ◽

Yoshihiro Toya ◽

Fumio Matsuda ◽

Hiroshi Shimizu

Keyword(s):

Escherichia Coli ◽

Metabolic Flux Analysis ◽

Metabolic Flux ◽

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Metabolic flux analysis of Escherichia coli K-12 based on 13C-labeling experiments with measurement of intracellular metabolite concentrations for carbon source-limited and nitrogen source-limited chemostat cultures

Metabolic Engineering ◽

10.1016/s1096-7176(03)00045-4 ◽

2003 ◽

Author(s):

J Zhu

Keyword(s):

Escherichia Coli ◽

Carbon Source ◽

Nitrogen Source ◽

Metabolic Flux Analysis ◽

Metabolic Flux ◽

Flux Analysis ◽

Intracellular Metabolite ◽

Chemostat Cultures ◽

Metabolite Concentrations ◽

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Metabolic flux analysis of Escherichia coli K12 grown on 13C-labeled acetate and glucose using GC-MS and powerful flux calculation method

Journal of Biotechnology ◽

10.1016/s0168-1656(02)00316-4 ◽

2003 ◽

Vol 101 (2) ◽

pp. 101-117 ◽

Author(s):

Jiao Zhao ◽

Kazuyuki Shimizu

Keyword(s):

Escherichia Coli ◽

Metabolic Flux Analysis ◽

Calculation Method ◽

Metabolic Flux ◽

Flux Analysis ◽

Flux Calculation ◽

Escherichia Coli K12

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Effect of lpdA gene knockout on the metabolism in Escherichia coli based on enzyme activities, intracellular metabolite concentrations and metabolic flux analysis by 13C-labeling experiments

Journal of Biotechnology ◽

10.1016/j.jbiotec.2005.09.016 ◽

2006 ◽

Vol 122 (2) ◽

pp. 254-266 ◽

Author(s):

Mai Li ◽

Pei Yee Ho ◽

Shanjing Yao ◽

Kazuyuki Shimizu

Keyword(s):

Escherichia Coli ◽

Metabolic Flux Analysis ◽

Enzyme Activities ◽

Metabolic Flux ◽

Gene Knockout ◽

Flux Analysis ◽

Intracellular Metabolite ◽

13C Labeling ◽

Metabolite Concentrations

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Metabolic flux analysis of biological hydrogen production by Escherichia coli

International Journal of Hydrogen Energy ◽

10.1016/j.ijhydene.2007.03.033 ◽

2007 ◽

Vol 32 (16) ◽

pp. 3820-3830 ◽

Author(s):

S MANISH ◽

K VENKATESH ◽

R BANERJEE

Keyword(s):

Escherichia Coli ◽

Hydrogen Production ◽

Metabolic Flux Analysis ◽

Metabolic Flux ◽

Flux Analysis ◽

Biological Hydrogen Production

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Metabolic flux analysis of Escherichia coli MG1655 under octanoic acid (C8) stress

Applied Microbiology and Biotechnology ◽

10.1007/s00253-015-6387-6 ◽

2015 ◽

Vol 99 (10) ◽

pp. 4397-4408 ◽

Author(s):

Yanfen Fu ◽

Jong Moon Yoon ◽

Laura Jarboe ◽

Jacqueline V. Shanks

Keyword(s):

Escherichia Coli ◽

Metabolic Flux Analysis ◽

Metabolic Flux ◽

Octanoic Acid ◽

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13C-Metabolic Flux Analysis for Escherichia coli

Methods in Molecular Biology - Metabolic Flux Analysis ◽

10.1007/978-1-4939-1170-7_16 ◽

2014 ◽

pp. 261-289

Author(s):

Yu Matsuoka ◽

Kazuyuki Shimizu

Keyword(s):

Escherichia Coli ◽

Metabolic Flux Analysis ◽

Metabolic Flux ◽

Flux Analysis ◽

13C Metabolic Flux Analysis

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Metabolic flux analysis of Escherichia coli ArcA and CreB mutants reveals shared control of carbon catabolism under microaerobic conditions of growth

New Biotechnology ◽

10.1016/j.nbt.2009.06.791 ◽

2009 ◽

Vol 25 ◽

pp. S327

Author(s):

P.I. Nikel ◽

J. Zhu ◽

K.Y. San ◽

M.A. Galvagno ◽

B.S. Méndez ◽

...

Keyword(s):

Escherichia Coli ◽

Metabolic Flux Analysis ◽

Metabolic Flux ◽

Shared Control ◽

Flux Analysis ◽

Microaerobic Conditions

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Metabolic flux analysis of yfiD gene knockout Escherichia coli based on 13C-labeling experiments under anaerobic conditions

Journal of Biotechnology ◽

10.1016/j.jbiotec.2008.07.066 ◽

2008 ◽

Vol 136 ◽

pp. S34 ◽

Author(s):

Zihe Liu ◽

Qingzhao Wang ◽

Xueming Zhao

Keyword(s):

Escherichia Coli ◽

Metabolic Flux Analysis ◽

Metabolic Flux ◽

Gene Knockout ◽

Flux Analysis ◽

Anaerobic Conditions ◽

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Metabolic Flux Analysis for Escherichia coli by Flux Balance Analysis

Methods in Molecular Biology - Metabolic Flux Analysis ◽

10.1007/978-1-4939-1170-7_15 ◽

2014 ◽

pp. 237-260 ◽

Author(s):

Yu Matsuoka ◽

Kazuyuki Shimizu

Keyword(s):

Escherichia Coli ◽

Flux Balance Analysis ◽

Metabolic Flux Analysis ◽

Metabolic Flux ◽

Flux Analysis ◽

Flux Balance ◽

Balance Analysis

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Elucidation of the co-metabolism of glycerol and glucose in Escherichia coli by genetic engineering, transcription profiling, and 13C metabolic flux analysis

Biotechnology for Biofuels ◽

10.1186/s13068-016-0591-1 ◽

2016 ◽

Vol 9 (1) ◽

Author(s):

Ruilian Yao ◽

Dewang Xiong ◽

Hongbo Hu ◽

Masataka Wakayama ◽

Wenjuan Yu ◽

...

Keyword(s):

Escherichia Coli ◽

Genetic Engineering ◽

Metabolic Flux Analysis ◽

Metabolic Flux ◽

Flux Analysis ◽

Transcription Profiling ◽

13C Metabolic Flux Analysis

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