Brassica juncea leaf cuticle proteome analysis shows myrosinase protein, antifreeze activity, and post-translationally modified secretory proteins

2021 ◽  
Vol 161 ◽  
pp. 234-247
Author(s):  
Meenakshi Arya ◽  
Satya Prakash ◽  
Yaiphabi Sougrakpam ◽  
Renu Deswal
Pathogens ◽  
2021 ◽  
Vol 10 (7) ◽  
pp. 852
Author(s):  
Abhijit Sarma ◽  
Dhandapani Gunasekaran ◽  
Devasahayam Arokia Balaya Rex ◽  
Thoduvayil Sikha ◽  
Homen Phukan ◽  
...  

Leptospirosis is a re-emerging form of zoonosis that is caused by the spirochete pathogen Leptospira. Extracellular proteins play critical roles in the pathogenicity and survival of this pathogen in the host and environment. Extraction and analysis of extracellular proteins is a difficult task due to the abundance of enrichments like serum and bovine serum albumin in the culture medium, as is distinguishing them from the cellular proteins that may reach the analyte during extraction. In this study, extracellular proteins were separated as secretory proteins from the culture supernatant and surface proteins were separated during the washing of the cell pellet. The proteins identified were sorted based on the proportion of the cellular fractions and the extracellular fractions. The results showed the identification of 56 extracellular proteins, out of which 19 were exclusively extracellular. For those proteins, the difference in quantity with respect to their presence within the cell was found to be up to 1770-fold. Further, bioinformatics analysis elucidated characteristics and functions of the identified proteins. Orthologs of extracellular proteins in various Leptospira species were found to be closely related among different pathogenic forms. In addition to the identification of extracellular proteins, this study put forward a method for the extraction and identification of extracellular proteins.


2015 ◽  
Vol 7 ◽  
pp. III.S24755 ◽  
Author(s):  
Satarudra Prakash Singh ◽  
Vishal Verma ◽  
Bhartendu Nath Mishra

Malaria is a complex parasitic disease that is currently causing great concerns globally owing to the resistance to antimalarial drugs and lack of an effective vaccine. The present study involves the characterization of extracellular secretory proteins as vaccine candidates derived from proteome analysis of Plasmodium falciparum at asexual blood stages of malaria. Among the screened 32 proteins, 31 were predicted as antigens by the VaxiJen program, and 26 proteins had less than two transmembrane spanning regions predicted using the THMMM program. Moreover, 10 and 5 proteins were predicted to contain secretory signals by SignalP and TargetP, respectively. T-cell epitope prediction using MULTIPRED2 and NetCTL programs revealed that most of the predicted antigens are immunogenic and contain more than 10% supertype and 5% promiscuous epitopes of HLA-A, -B, or -DR. We anticipate that T-cell immune responses against asexual blood stages of Plasmodium are dispersed on a relatively large number of parasite antigens. This is the first report, to the best of our knowledge, offering new insights, at the proteome level, for the putative screening of effective vaccine candidates against the malaria pathogen. The findings also suggest new ways forward for the modern omics-guided vaccine target discovery using reverse vaccinology.


Cryobiology ◽  
2021 ◽  
Vol 103 ◽  
pp. 197
Author(s):  
Kailash Yadav ◽  
Satya Prakash ◽  
Renu Deswal
Keyword(s):  

2017 ◽  
Vol 22 (10) ◽  
pp. 1229-1238 ◽  
Author(s):  
Divakar Sharma ◽  
Deepa Bisht

Tuberculosis still remains one of the most fatal infectious diseases. Streptomycin (SM) is the drug of choice, especially for patients with multidrug-resistant tuberculosis or category II patients, because it targets the protein synthesis machinery by interacting with steps of translation. Several mechanisms have been proposed to explain the resistance, but our knowledge is inadequate. Secretome often plays an important role in pathogenesis and is considered an attractive reservoir for the development of novel diagnostic markers and targets. In this study, we analyze the secretory proteins of streptomycin-resistant Mycobacterium tuberculosis isolates by 2-dimensional gel electrophoresis–matrix assisted laser desorption/ionization–time-of-flight mass spectrometry and bioinformatic tools. Fifteen overexpressed proteins were identified in a resistant isolate that belonged to various categories such as virulence/detoxification/adaptation, intermediary metabolism and respiration, and conserved hypotheticals. Among them, Rv1860, Rv1980c, Rv2140c, Rv1636, and Rv1926c were proteins of an undefined role. Molecular docking of these proteins with SM showed that it binds to their conserved domains and suggests that these might neutralize/compensate the effect of the drug. The interactome also suggests that overexpressed proteins along with their interactive partner might be involved in M. tuberculosis virulence and resistance. The cumulative effect of these overexpressed proteins could involve SM resistance, and these might be used as diagnostic markers or potential drug targets.


2016 ◽  
Vol 13 (1) ◽  
Author(s):  
Jorim Anak Ujang ◽  
Soon Hong Kwan ◽  
Mohd Nazri Ismail ◽  
Boon Huat Lim ◽  
Rahmah Noordin ◽  
...  

PROTEOMICS ◽  
2005 ◽  
Vol 5 (6) ◽  
pp. 1544-1557 ◽  
Author(s):  
Matthias Trost ◽  
Dirk Wehmhöner ◽  
Uwe Kärst ◽  
Guido Dieterich ◽  
Jürgen Wehland ◽  
...  

2014 ◽  
Vol 35 (10) ◽  
pp. 3071-3076 ◽  
Author(s):  
Won-Kyu Lee ◽  
Hye-Jin Ahn ◽  
Je-Hyun Baek ◽  
Chong-Heon Lee ◽  
Yeon Gyu Yu ◽  
...  

Author(s):  
William J. Dougherty

The regulation of secretion in exocrine and endocrine cells has long been of interest. Electron microscopic and other studies have demonstrated that secretory proteins synthesized on ribosomes are transported by the rough ER to the Golgi complex where they are concentrated into secretory granules. During active secretion, secretory granules fuse with the cell membrane, liberating and discharging their contents into the perivascular spaces. When secretory activity is suppressed in anterior pituitary cells, undischarged secretory granules may be degraded by lysosomes. In the parathyroid gland, evidence indicates that the level of blood Ca ions regulates both the production and release of parathormone. Thus, when serum Ca is low, synthesis and release of parathormone are both stimulated; when serum Ca is elevated, these processes are inhibited.


1992 ◽  
Vol 103 (7-8) ◽  
pp. 469-507 ◽  
Author(s):  
Th. Gladis ◽  
K. Hammer
Keyword(s):  

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