Predicting antibiotic resistance gene abundance in activated sludge using shotgun metagenomics and machine learning

Water Research ◽

10.1016/j.watres.2021.117384 ◽

2021 ◽

pp. 117384

Author(s):

Yuepeng Sun ◽

Bertrand Clarke ◽

Jennifer Clarke ◽

Xu Li

Keyword(s):

Machine Learning ◽

Antibiotic Resistance ◽

Activated Sludge ◽

Resistance Gene ◽

Antibiotic Resistance Gene ◽

Shotgun Metagenomics ◽

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Coexistence of silver ion and tetracycline at environmentally relevant concentrations greatly enhanced antibiotic resistance gene development in activated sludge bioreactor

Journal of Hazardous Materials ◽

10.1016/j.jhazmat.2021.127088 ◽

2021 ◽

pp. 127088

Author(s):

Zheng-Hao Li ◽

Li Yuan ◽

Li Wang ◽

Qian-He Liu ◽

Guo-Ping Sheng

Keyword(s):

Antibiotic Resistance ◽

Activated Sludge ◽

Resistance Gene ◽

Antibiotic Resistance Gene ◽

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Simulated wastewater reduced Klebsiella michiganensis strain LH-2 viability and corresponding antibiotic resistance gene abundance in bio-electrochemical reactors

Ecotoxicology and Environmental Safety ◽

10.1016/j.ecoenv.2018.07.018 ◽

2018 ◽

Vol 162 ◽

pp. 376-382 ◽

Author(s):

Hua Li ◽

Shuai Zhang ◽

Xiao-Li Yang ◽

Han Xu ◽

Yu-Li Yang ◽

...

Keyword(s):

Antibiotic Resistance ◽

Resistance Gene ◽

Antibiotic Resistance Gene ◽

Electrochemical Reactors ◽

Gene Abundance ◽

Simulated Wastewater

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Biological Mitigation of Antibiotic Resistance Gene Dissemination by Antioxidant-Producing Microorganisms in Activated Sludge Systems

Environmental Science & Technology ◽

10.1021/acs.est.1c04641 ◽

2021 ◽

Author(s):

Chong-Yang Ren ◽

En-Ling Wu ◽

Erica M. Hartmann ◽

He-Ping Zhao

Keyword(s):

Antibiotic Resistance ◽

Activated Sludge ◽

Resistance Gene ◽

Antibiotic Resistance Gene ◽

Activated Sludge Systems

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Sulfamethoxazole affects the microbial composition and antibiotic resistance gene abundance in soil and accumulates in lettuce

Environmental Science and Pollution Research ◽

10.1007/s11356-020-08902-1 ◽

2020 ◽

Vol 27 (23) ◽

pp. 29257-29265 ◽

Author(s):

Shoutao Cheng ◽

Mingming Shi ◽

Lijun Xing ◽

Xuming Wang ◽

Haoze Gao ◽

...

Keyword(s):

Antibiotic Resistance ◽

Resistance Gene ◽

Antibiotic Resistance Gene ◽

Microbial Composition ◽

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Tracking antibiotic resistance gene transfers in activated sludge reactors

Proceedings of the Water Environment Federation ◽

10.2175/193864708788808870 ◽

2008 ◽

Vol 2008 (7) ◽

pp. 7524-7537

Author(s):

Sébastien Bonot ◽

Sophie Courtois ◽

Zdravka Do Quang ◽

Jean-Marc Audic ◽

Jean-Claude Block ◽

...

Keyword(s):

Antibiotic Resistance ◽

Activated Sludge ◽

Resistance Gene ◽

Antibiotic Resistance Gene

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The correlation between antibiotic resistance gene abundance and microbial community resistance in pig farm wastewater and surrounding rivers

Ecotoxicology and Environmental Safety ◽

10.1016/j.ecoenv.2019.109452 ◽

2019 ◽

Vol 182 ◽

pp. 109452 ◽

Author(s):

Yiwen Yang ◽

Zixiao Liu ◽

Sicheng Xing ◽

Xindi Liao

Keyword(s):

Antibiotic Resistance ◽

Microbial Community ◽

Resistance Gene ◽

Antibiotic Resistance Gene ◽

Community Resistance ◽

Gene Abundance ◽

Pig Farm ◽

Farm Wastewater

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Antibiotic resistance gene abundance and bacterial community structure in soils altered by Ammonium and Nitrate Concentrations

Soil Biology and Biochemistry ◽

10.1016/j.soilbio.2020.107965 ◽

2020 ◽

Vol 149 ◽

pp. 107965 ◽

Author(s):

Silu Sun ◽

Chao Lu ◽

Juan Liu ◽

Mark A. Williams ◽

Zhiyao Yang ◽

...

Keyword(s):

Antibiotic Resistance ◽

Community Structure ◽

Bacterial Community ◽

Resistance Gene ◽

Bacterial Community Structure ◽

Antibiotic Resistance Gene ◽

Gene Abundance ◽

Nitrate Concentrations

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A novel microfluidic system enables visualization and analysis of antibiotic resistance gene transfer to activated sludge bacteria in biofilm

The Science of The Total Environment ◽

10.1016/j.scitotenv.2018.06.012 ◽

2018 ◽

Vol 642 ◽

pp. 582-590 ◽

Author(s):

Yong Qiu ◽

Jing Zhang ◽

Bing Li ◽

Xianghua Wen ◽

Peng Liang ◽

...

Keyword(s):

Antibiotic Resistance ◽

Gene Transfer ◽

Activated Sludge ◽

Resistance Gene ◽

Antibiotic Resistance Gene ◽

Microfluidic System ◽

Activated Sludge Bacteria

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Effect of antibiotic use and composting on antibiotic resistance gene abundance and resistome risks of soils receiving manure-derived amendments

Environment International ◽

10.1016/j.envint.2019.04.043 ◽

2019 ◽

Vol 128 ◽

pp. 233-243 ◽

Author(s):

Chaoqi Chen ◽

Christine A. Pankow ◽

Min Oh ◽

Lenwood S. Heath ◽

Liqing Zhang ◽

...

Keyword(s):

Antibiotic Resistance ◽

Resistance Gene ◽

Antibiotic Resistance Gene ◽

Antibiotic Use ◽

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Reducing water use by alternate-furrow irrigation with livestock wastewater reduces antibiotic resistance gene abundance in the rhizosphere but not in the non-rhizosphere

The Science of The Total Environment ◽

10.1016/j.scitotenv.2018.08.101 ◽

2019 ◽

Vol 648 ◽

pp. 12-24 ◽

Author(s):

Yuan Liu ◽

Erping Cui ◽

Andrew L. Neal ◽

Xiaoxian Zhang ◽

Zhongyang Li ◽

...

Keyword(s):

Antibiotic Resistance ◽

Resistance Gene ◽

Water Use ◽

Antibiotic Resistance Gene ◽

Furrow Irrigation ◽

Livestock Wastewater ◽

Gene Abundance ◽

Alternate Furrow Irrigation

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