scholarly journals Site-specific ADP-ribosylation of histone H2B in response to DNA double strand breaks

2017 ◽  
Vol 7 (1) ◽  
Author(s):  
Alina Rakhimova ◽  
Seiji Ura ◽  
Duen-Wei Hsu ◽  
Hong-Yu Wang ◽  
Catherine J. Pears ◽  
...  
2001 ◽  
Vol 29 (6) ◽  
pp. 655-661 ◽  
Author(s):  
S. P. Jackson

DNA double-strand breaks (DSBs) can be generated by a variety of genotoxic agents, including ionizing radiation and radiomimetic chemicals. They can also occur when DNA replication complexes encounter other forms of DNA damage, and are produced as intermediates during certain site-specific recombination processes. It is crucial that cells recognize DSBs and bring about their efficient repair, because a single unrepaired cellular DSB can induce cell death, and defective DSB repair can lead to mutations or the loss of significant segments of chromosomal material. Eukaryotic cells have evolved a variety of systems to detect DNA DSBs, repair them, and signal their presence to the transcription, cell cycle and apoptotic machineries. In this review, I describe how work on mammalian cells and also on model organisms such as yeasts has revelaed that such systems are highly conserved throughout evolution, and has provided insights into the molecular mechanisms by which DNA DSBs are recognized, signalled and repaired. I also explain how defects in the proteins that function in these pathways are associated with a variety of human pathological states.


Oncogene ◽  
2005 ◽  
Vol 24 (10) ◽  
pp. 1663-1672 ◽  
Author(s):  
Jochen Dahm-Daphi ◽  
Petra Hubbe ◽  
Fruzsina Horvath ◽  
Raafat A El-Awady ◽  
Katie E Bouffard ◽  
...  

Author(s):  
Susanna Ambrosio ◽  
Stefano Amente ◽  
Giuliana Napolitano ◽  
Giacomo Di Palo ◽  
Luigi Lania ◽  
...  

2011 ◽  
Vol 41 (5) ◽  
pp. 529-542 ◽  
Author(s):  
Lilach Moyal ◽  
Yaniv Lerenthal ◽  
Mali Gana-Weisz ◽  
Gilad Mass ◽  
Sairei So ◽  
...  

2014 ◽  
Vol 26 (5) ◽  
pp. 2156-2167 ◽  
Author(s):  
Giang T.H. Vu ◽  
Hieu X. Cao ◽  
Koichi Watanabe ◽  
Goetz Hensel ◽  
Frank R. Blattner ◽  
...  

2011 ◽  
Vol 42 (1) ◽  
pp. 137 ◽  
Author(s):  
Lilach Moyal ◽  
Yaniv Lerenthal ◽  
Mali Gana-Weisz ◽  
Gilad Mass ◽  
Sairei So ◽  
...  

2017 ◽  
Author(s):  
Yingjie Zhu ◽  
Anna Biernacka ◽  
Benjamin Pardo ◽  
Norbert Dojer ◽  
Romain Forey ◽  
...  

AbstractSequencing-based methods for mapping DNA double-strand breaks (DSBs) allow measurement only of relative frequencies of DSBs between loci, which limits our understanding of the physiological relevance of detected DSBs. We propose quantitative DSB sequencing (qDSB-Seq), a method providing both DSB frequencies per cell and their precise genomic coordinates. We induced spike-in DSBs by a site-specific endonuclease and used them to quantify labeled DSBs (e.g. using i-BLESS). Utilizing qDSB-Seq, we determined numbers of DSBs induced by a radiomimetic drug and various forms of replication stress, and revealed several orders of magnitude differences in DSB frequencies. We also measured for the first time Top1-dependent absolute DSB frequencies at replication fork barriers. qDSB-Seq is compatible with various DSB labeling methods in different organisms and allows accurate comparisons of absolute DSB frequencies across samples.


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