Prevalent Mutations of Human Prion Protein: A Molecular Modeling and Molecular Dynamics Study

Journal of Biomolecular Structure and Dynamics ◽

10.1080/07391102.2011.10507392 ◽

2011 ◽

Vol 29 (2) ◽

pp. 379-389 ◽

Author(s):

Esmaeil Behmard ◽

Parviz Abdolmaleki ◽

Ebrahim Barzegari Asadabadi ◽

Samad Jahandideh

Keyword(s):

Molecular Dynamics ◽

Molecular Modeling ◽

Prion Protein ◽

Protein A ◽

Human Prion Protein

Download Full-text

Systematic investigation of predicted effect of nonsynonymous SNPs in human prion protein gene: a molecular modeling and molecular dynamics study

Journal of Biomolecular Structure and Dynamics ◽

10.1080/07391102.2012.763216 ◽

2013 ◽

Vol 32 (2) ◽

pp. 289-300 ◽

Author(s):

Samad Jahandideh ◽

Degui Zhi

Keyword(s):

Molecular Dynamics ◽

Molecular Modeling ◽

Prion Protein ◽

Protein Gene ◽

Systematic Investigation ◽

Nonsynonymous Snps ◽

Prion Protein Gene ◽

Human Prion Protein

Download Full-text

How graphene affects the misfolding of human prion protein: A combined experimental and molecular dynamics simulation study

Environmental Research ◽

10.1016/j.envres.2018.12.057 ◽

2019 ◽

Vol 171 ◽

pp. 1-10 ◽

Author(s):

Yongchang Zhu ◽

Jingjing Guo ◽

Ai Zhang ◽

Lanlan Li ◽

Xuewei Liu ◽

...

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Prion Protein ◽

Simulation Study ◽

Protein A ◽

Dynamics Simulation ◽

Human Prion Protein

Download Full-text

The complex-formation behaviour of His residues in the fifth Cu2+ binding site of human prion protein: a close look

New Journal of Chemistry ◽

10.1039/b9nj00202b ◽

2009 ◽

Vol 33 (11) ◽

pp. 2300 ◽

Author(s):

Maurizio Remelli ◽

Daniela Valensin ◽

Dimitri Bacco ◽

Ewa Gralka ◽

Remo Guerrini ◽

...

Keyword(s):

Complex Formation ◽

Binding Site ◽

Prion Protein ◽

Protein A ◽

Human Prion Protein

Download Full-text

WITHDRAWN: Molecular dynamics studies of mutants of the human prion protein in relation to Creutzfeldt-Jakob disease

Biochemical and Biophysical Research Communications ◽

10.1016/j.bbrc.2006.08.167 ◽

2006 ◽

Author(s):

Dooil Kim

Keyword(s):

Molecular Dynamics ◽

Prion Protein ◽

Jakob Disease ◽

Human Prion Protein

Download Full-text

Assessing the acid–base and conformational properties of histidine residues in human prion protein (125–228) by means of pK a calculations and molecular dynamics simulations

Proteins Structure Function and Bioinformatics ◽

10.1002/prot.20979 ◽

2006 ◽

Vol 64 (1) ◽

pp. 167-177 ◽

Author(s):

Emma Langella ◽

Roberto Improta ◽

Orlando Crescenzi ◽

Vincenzo Barone

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Prion Protein ◽

Acid Base ◽

Histidine Residues ◽

Conformational Properties ◽

Human Prion Protein ◽

Dynamics Simulations

Download Full-text

Molecular dynamics simulations of wild-type and point mutation human prion protein at normal and elevated temperature

Journal of Molecular Graphics and Modelling ◽

10.1016/s1093-3263(01)00113-9 ◽

2001 ◽

Vol 20 (2) ◽

pp. 145-154 ◽

Author(s):

Eman El-Bastawissy ◽

Michael H. Knaggs ◽

Ian H. Gilbert

Keyword(s):

Molecular Dynamics ◽

Elevated Temperature ◽

Molecular Dynamics Simulations ◽

Point Mutation ◽

Prion Protein ◽

Wild Type ◽

Human Prion Protein ◽

Dynamics Simulations

Download Full-text

Comparison of the unfolding and oligomerization of human prion protein under acidic and neutral environments by molecular dynamics simulations

Chemical Physics Letters ◽

10.1016/j.cplett.2018.07.014 ◽

2018 ◽

Vol 706 ◽

pp. 594-600 ◽

Author(s):

Ya Gao ◽

Tong Zhu ◽

Chaomin Zhang ◽

John Z.H. Zhang ◽

Ye Mei

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Prion Protein ◽

Human Prion Protein ◽

Dynamics Simulations

Download Full-text

Constant-pH Molecular Dynamics Simulations Reveal a β-Rich Form of the Human Prion Protein

The Journal of Physical Chemistry B ◽

10.1021/jp104753t ◽

2010 ◽

Vol 114 (39) ◽

pp. 12692-12700 ◽

Author(s):

Sara R. R. Campos ◽

Miguel Machuqueiro ◽

António M. Baptista

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Prion Protein ◽

Constant Ph ◽

Human Prion Protein ◽

Dynamics Simulations ◽

Constant Ph Molecular Dynamics

Download Full-text

Sequence-dependent dynamical instability of the human prion protein: a comparative simulation study

Journal of Biomolecular Structure and Dynamics ◽

10.1080/07391102.2017.1375430 ◽

2017 ◽

Vol 36 (11) ◽

pp. 3023-3033 ◽

Author(s):

Kourosh Bamdad

Keyword(s):

Prion Protein ◽

Simulation Study ◽

Protein A ◽

Dynamical Instability ◽

Sequence Dependent ◽

Human Prion Protein

Download Full-text

Human Prion Protein Helices: Studying Their Stability by Molecular Dynamics Simulations (SUPPLEMENTARY MATERIAL)

Protein and Peptide Letters ◽

10.2174/092986609789055313 ◽

2009 ◽

Vol 16 (9) ◽

pp. 1057-1062 ◽

Author(s):

Susan Costantini ◽

Angelo Facchiano

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Prion Protein ◽

Human Prion Protein ◽

Supplementary Material ◽

Dynamics Simulations

Download Full-text