Occurrence and molecular characterization of Pepper veinal mottle virus from solanaceous crops

Author(s):  
Adedapo O. Adediji ◽  
Temitope I. Fakolujo ◽  
Gabriel I. Atiri
Genetika ◽  
2015 ◽  
Vol 47 (2) ◽  
pp. 651-663 ◽  
Author(s):  
Dragana Milosevic ◽  
Ivana Stankovic ◽  
Aleksandra Bulajic ◽  
Maja Ignjatov ◽  
Zorica Nikolic ◽  
...  

During 2009 and 2010, a survey was conducted in pepper crops to detect the possible presence of Pepper mild mottle virus (PMMoV) in Serbia. A total of 239 pepper samples from 39 crops at 26 localities were collected and analyzed for the presence of PMMoV, Cucumber mosaic virus (CMV), Potato virus Y (PVY), and Alfalfa mosaic virus (AMV), using DAS-ELISA test. Although it was detected in a small percentage, PMMoV could pose a threat to pepper production in Serbia due to its rapid seed-borne spread. Presence of PMMoV was confirmed by serological and biological detection, followed by conventional reverse transcription RT-PCR, using primers specific for the RNA-dependent RNA polymerase (RdRp) and the coat protein (CP) genes. Molecular identification confirmed that the Serbian isolates belong to PMMoV pathotypes P1,2 which do not break the resistance gene L3. Reconstructed phylogenetic tree confirmed the allocation of the Serbian isolates together with the majority of PMMoV isolates which belong to pathotypes P1,2. This study represents the first serological and molecular characterization of PMMoV infection of pepper in Serbia, and provides important data on the population structure. The obtained data could have great influence on pepper production in Serbia as well as future pepper resistance breeding in the country.


2008 ◽  
Vol 57 (3) ◽  
pp. 408-416 ◽  
Author(s):  
W. S. Tsai ◽  
Y. C. Huang ◽  
D. Y. Zhang ◽  
K. Reddy ◽  
S. H. Hidayat ◽  
...  

VirusDisease ◽  
2014 ◽  
Vol 25 (3) ◽  
pp. 331-337 ◽  
Author(s):  
K. Soumya ◽  
M. Yogita ◽  
Y. Prasanthi ◽  
K. Anitha ◽  
P. B. Kavi Kishor ◽  
...  

1998 ◽  
Vol 79 (9) ◽  
pp. 2275-2281 ◽  
Author(s):  
Y P Zhang ◽  
J K Uyemoto ◽  
C D Smart ◽  
B C Kirkpatrick

Viruses ◽  
2018 ◽  
Vol 10 (4) ◽  
pp. 169 ◽  
Author(s):  
Rafaela Fontenele ◽  
Rayane Abreu ◽  
Natalia Lamas ◽  
Dione Alves-Freitas ◽  
Andreza Vidal ◽  
...  

2007 ◽  
Vol 97 (10) ◽  
pp. 1255-1262 ◽  
Author(s):  
Chunquan Zhang ◽  
Hongcang Gu ◽  
Said A. Ghabrial

The Bean pod mottle virus, a member of the genus Comovirus, has a bipartite genome consisting of RNA1 and RNA2. We previously reported the occurrence in nature of two distinct subgroups of BPMV strains (subgroups I and II), as well as reassortants between the two subgroups. Here, we report on the isolation and molecular characterization of RNA1 recombinants from soybean plants infected with the partial diploid reassortant strain IL-Cb1, which induces very severe symptoms on soybean. cDNA cloning and sequencing of RNA1 from strain IL-Cb1 revealed the presence of chimeric and mosaic recombinant RNA1s. The full-length mosaic and chimeric recombinant RNA1s were infectious and induced mild symptoms on soybean. Although the recombinant RNA1 accumulated to high levels in the absence of wild-type RNA1, its accumulation level was low in mixed infections with wild-type RNA1. Recombinant RNA1 molecules with similar structures to the naturally occurring recombinant RNA1s were generated in soybean after four passages following inoculation with RNA1 transcripts derived from cDNAs of two distinct strains. This suggests that recombination events are frequent and that a recombination hot spot exists. Sequence analysis of the recombination region showed that it has AU-rich sequences characteristic of recombination hot spots.


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