scholarly journals Numerical study of a model of terahertz collective modes in DNA

2021 ◽  
Vol 2094 (2) ◽  
pp. 022012
Author(s):  
V E Zakhvataev ◽  
O S Volodko ◽  
L A Kompaniets ◽  
D V Zlobin

Abstract Terahertz density fluctuations in DNA have been recognized to be associated with biological function of DNA and widely studied both experimentally and theoretically. In the present work, we investigate numerically a new model for the terahertz dynamics of density fluctuations in DNA, proposed earlier. This model considers the length scales corresponding to wave numbers up to the position of the maximum of the static structure factor and allows to reflect structural effects caused by the dependence of the static structure factor on wave number. We study the parametric dependencies of the model to elucidate the effect of dlocalization of the dynamics of density fluctuations caused by structural effects.

2021 ◽  
Vol 118 (3) ◽  
pp. e2016862118
Author(s):  
Duyu Chen ◽  
Yu Zheng ◽  
Lei Liu ◽  
Ge Zhang ◽  
Mohan Chen ◽  
...  

Disordered hyperuniformity (DHU) is a recently discovered novel state of many-body systems that possesses vanishing normalized infinite-wavelength density fluctuations similar to a perfect crystal and an amorphous structure like a liquid or glass. Here, we discover a hyperuniformity-preserving topological transformation in two-dimensional (2D) network structures that involves continuous introduction of Stone–Wales (SW) defects. Specifically, the static structure factor S(k) of the resulting defected networks possesses the scaling S(k)∼kα for small wave number k, where 1≤α(p)≤2 monotonically decreases as the SW defect concentration p increases, reaches α≈1 at p≈0.12, and remains almost flat beyond this p. Our findings have important implications for amorphous 2D materials since the SW defects are well known to capture the salient feature of disorder in these materials. Verified by recently synthesized single-layer amorphous graphene, our network models reveal unique electronic transport mechanisms and mechanical behaviors associated with distinct classes of disorder in 2D materials.


2000 ◽  
Vol 276-278 ◽  
pp. 369-370 ◽  
Author(s):  
G. Meier ◽  
U. Pawelzik ◽  
W. Schweika ◽  
W. Kockelmann

2014 ◽  
Vol 21 (7) ◽  
pp. 073704 ◽  
Author(s):  
A. E. Davletov ◽  
L. T. Yerimbetova ◽  
Ye. S. Mukhametkarimov ◽  
A. K. Ospanova

2004 ◽  
Vol 350 (1-3) ◽  
pp. E1067-E1069
Author(s):  
M Celli ◽  
F Formisano ◽  
E Guarini ◽  
R Magli ◽  
M Zoppi ◽  
...  

2019 ◽  
Vol 1252 ◽  
pp. 012003
Author(s):  
Devilal Dahal ◽  
Raymond Atta-Fynn ◽  
S. R. Elliott ◽  
Parthapratim Biswas

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