scholarly journals Classification of human skin Raman spectra using multivariate curve resolution (MCR) and partial least squares discriminant analysis (PLS-DA)

2021 ◽  
Vol 2127 (1) ◽  
pp. 012065
Author(s):  
I Matveeva ◽  
Y Khristoforova ◽  
A Moryatov ◽  
O Myakinin ◽  
I Bratchenko ◽  
...  

Abstract The main purpose of the paper is classification of the human skin Raman spectra using partial least squares discriminant analysis (PLS-DA) into classes depending on the disease. In vivo Raman spectra of normal skin, basal cell carcinoma, malignant melanoma and pigmented nevus are considered. A feature of the approach is the analysis not of the Raman spectra themselves, but of the concentrations of the eight most significant spectra components identified using multivariate curve resolution (MCR). As a result, the ROC curve was calculated and the optimal classification threshold was chosen. The accuracy of the classification models ranged from 63.3 to 86.7%, depending on the model. The findings suggest that this approach could also be useful for classification of specific diseases.

2008 ◽  
Vol 22 (6) ◽  
pp. 437-457 ◽  
Author(s):  
Tanja M. Greve ◽  
Kristine B. Andersen ◽  
Ole F. Nielsen

ATR-FTIR, FT-NIR and near-FT-Raman spectroscopy were used to characterize the molecular composition of human skinin vivoand pig ear skinin vitro. Due to different measurement depths the spectroscopic techniques reveal the characteristics of different layers of the skin. Tape stripping was used with the ATR-FTIR technique. Spectral differences concerning lipid content and conformation, protein secondary structure or content of water were found with respect to both gender and species (i.e. human versus pig ear) at all measured skin depths. New assignments of so far unassigned lipid and protein peaks in the FT-NIR and ATR-FTIR spectra of skin were made. PCA and PLS models were used to investigate the division of the recorded spectra into groups. With respect to classification of male and female subjects, the PLS discriminant analysis provided a classification accuracy of 64–93% based on the ATR-FTIR spectra and 83–89% based on the Raman spectra. With respect to classification of human skinin vivoand pig ear skinin vitro, the PLS discriminant analysis provided a classification accuracy of 75–100% based on the Raman spectra and 100% based on the ATR-FTIR spectra.


RSC Advances ◽  
2015 ◽  
Vol 5 (86) ◽  
pp. 70017-70024 ◽  
Author(s):  
Hadi Parastar ◽  
Hamidreza Shaye

The potentials of PLSR and MCR-ALS are evaluated for the simultaneous determination of diclofenac, naproxen, mefenamic acid and carbamazepine as target analytes and gemfibrozil as interference in synthetic and real environmental samples.


The Analyst ◽  
2014 ◽  
Vol 139 (18) ◽  
pp. 4629-4633 ◽  
Author(s):  
Martin A. B. Hedegaard ◽  
Kristy L. Cloyd ◽  
Christine-Maria Horejs ◽  
Molly M. Stevens

Here we present a novel approach to analyse cells using Partial Least Squares – Discriminant Analysis (PLS-DA) Variable Importance Projection (VIP) scores normally used for variable selection as heat maps combined with group difference spectra to highlight significant differences in Raman band shapes and position.


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