scholarly journals Effects of Agonist and Regulator Binding on the Structure and Conformational Flexibility of the Ligand Binding Domains of Ionotropic Glutamate Receptors

2015 ◽  
Vol 29 (S1) ◽  
Author(s):  
Forest Barkdoll‐Weil ◽  
Carol Guzman ◽  
Zaka Asif ◽  
Philip Varnes ◽  
J Ellis Bell
2021 ◽  
Author(s):  
Max Bernhard ◽  
Bodo Laube

AbstractTetrameric ionotropic glutamate receptors (iGluRs) mediate excitatory neurotransmission in the mammalian central nervous system and are involved in learning, memory formation, and pathological processes. Based on structural and sequence similarities of the ligand-binding and channel domains of iGluR subunits to bacterial binding proteins and potassium channels, iGluRs are thought to have originally arisen from their fusion. Here we report the functional coupling of the bacterial ectoine binding protein EhuB to the channel pore-forming transmembrane domains of the bacterial GluR0 receptor by stabilization of dimeric binding domains. Insertion of a disulfide bridge in the dimer interface abolished desensitization of the channel current analogous to mammalian iGluRs. These results demonstrate the functional compatibility of bacterial binding proteins to the gate of the channel pore of an iGluR. Moreover, our results highlight the modular structure and crucial role of binding domain dimerization in the functional evolution of iGluRs.


Steroids ◽  
2012 ◽  
Vol 77 (7) ◽  
pp. 774-779 ◽  
Author(s):  
Krasnodara Cameron ◽  
Emily Bartle ◽  
Ryan Roark ◽  
David Fanelli ◽  
Melissa Pham ◽  
...  

2014 ◽  
Vol 106 (2) ◽  
pp. 152a
Author(s):  
Benoite Bargeton ◽  
Matteo Dal Peraro ◽  
Richard Benton

2010 ◽  
Vol 98 (3) ◽  
pp. 526a
Author(s):  
Margaret W. Thompson ◽  
Kathryn A. McMenimen ◽  
Henry A. Lester ◽  
Dennis A. Dougherty

2021 ◽  
Author(s):  
Jelena Baranovic ◽  
Sebastian Braunbeck ◽  
Nikolai Zaki ◽  
Sonja Minniberger ◽  
Miriam Chebli ◽  
...  

SummaryConotoxins are a large group of naturally occurring toxic peptides produced by the predatory sea snails of the genus Conus. Many of these toxins target ion channels, often with high specificity and affinity. As such, they have proven to be invaluable for basic research as well as acting as leads for therapeutic strategies. Con-ikot-ikot is the only conotoxin so far identified that targets AMPA-type glutamate receptors, the main mediators of excitatory neurotransmission in the vertebrate brain. Here, we describe how the toxin modifies the activity of AMPA receptors at the single-channel level. The toxin binds to the AMPA receptor with high affinity (EC50 = 5 nM) and once bound, takes minutes to wash out. As shown previously, it effectively blocks desensitization of AMPA receptors, however, compared to other desensitisation blockers, it is a poor stabiliser of the open channel because toxin-bound AMPA receptors undergo frequent, brief closures. We propose this is a direct consequence of its unique binding mode to the ligand binding domains. Unlike other blockers of desensitization, which stabilise individual dimers within an AMPA receptor tetramer, the toxin immobilizes all four ligand binding domains of the tetramer. This result further emphasises that quaternary reorganization of independent LBD dimers is essential for the full activity of AMPA receptors.


1997 ◽  
Vol 234 (2-3) ◽  
pp. 83-86
Author(s):  
Zsolt Jenei ◽  
Vince Varga ◽  
Réka Janáky ◽  
Pirjo Saransaari ◽  
Simo S Oja

Author(s):  
Ke Ren ◽  
Ronald Dubner

The known functional ionotropic glutamate receptors (iGluRs) are composed of three major subtypes: AMPA, NMDA, and kainate. In 1998, in the landmark paper discussed in this chapter, Armstrong et al. provided the first crystal structure of an iGluR-subunit ligand-binding core, the S1S2 region of the rat GluA2 ‘flop’ isoform. They solved its structure with X-ray crystallography from selenomethonine crystals. They also identified residues involved in kainate binding, analysed allosteric sites that regulate affinity and specificity of the agonist, and mapped potential subunit–subunit interaction sites. They also proposed that binding of different agonists may result in variable degrees of domain closure. This work has profound impact on the field and it has been importantly cited. Subsequently, numerous high-resolution crystal structures of ligand-binding domains of iGluRs in complex with ligands, both agonists and antagonists, have been solved.


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