scholarly journals In vitro transcripts of a full-length cDNA of a naturally deleted RNA2 of barley mild mosaic virus (BaMMV) replicate in BaMMV-infected plants

1995 ◽  
Vol 76 (10) ◽  
pp. 2619-2623 ◽  
Author(s):  
U. Timpe ◽  
T. Kuhne
2003 ◽  
Vol 148 (3) ◽  
pp. 563-574 ◽  
Author(s):  
K.-S. Kim ◽  
H.-Y. Oh ◽  
S. Suranto ◽  
E. Nurhayati ◽  
K. H. Gough ◽  
...  

Plants ◽  
2022 ◽  
Vol 11 (2) ◽  
pp. 226
Author(s):  
Marwa Hanafi ◽  
Wei Rong ◽  
Lucie Tamisier ◽  
Chadi Berhal ◽  
Nicolas Roux ◽  
...  

: The banana mild mosaic virus (BanMMV) (Betaflexiviridae, Quinvirinae, unassigned species) is a filamentous virus that infects Musa spp. and has a very wide geographical distribution. The current BanMMV indexing process for an accession requires the testing of no less than four plants cultivated in a greenhouse for at least 6 months and causes a significant delay for the distribution of the germplasm. We evaluated the sensitivity of different protocols for BanMMV detection from in vitro plants to accelerate the testing process. We first used corm tissues from 137 in vitro plants and obtained a diagnostic sensitivity (DSE) of only 61% when testing four plants per accession. After thermotherapy was carried out to eliminate BanMMV infection, the meristem was recovered and further grown in vitro. The same protocol was evaluated in parallel on the corm tissue surrounding the meristem, as a rapid screening to evaluate virus therapy success, and was compared to the results obtained following the standard protocol. The obtained results showed 28% false negatives when conducting testing from corm tissues, making this protocol unsuitable in routine processes. Furthermore, RT-PCR and high-throughput sequencing (HTS) tests were applied on tissues from the base (n = 39) and the leaves (n = 36). For RT-PCR, the average DSE per sample reached 65% from either the base or leaves. HTS was applied on 36 samples and yielded 100% diagnostic specificity (DSP) and 100% DSE, whatever the sampled tissue, allowing the identification of a new Betaflexiviridae species infecting Musa. These results suggest that a reliable diagnostic of BanMMV from in vitro plants using RT-PCR or HTS technologies might represent an efficient alternative for testing after greenhouse cultivation.


2002 ◽  
Vol 92 (2) ◽  
pp. 156-163 ◽  
Author(s):  
Ju Yeon Yoon ◽  
Byoung Eun Min ◽  
Jang Kyung Choi ◽  
Ki Hyun Ryu

The complete nucleotide sequence of the Zucchini green mottle mosaic virus (ZGMMV), a new member of the genus Tobamovirus, has been determined. The genome of ZGMMV is 6,513 nucleotides long and contains four open reading frames coding for proteins of 131, 189, 28, and 17 kDa from the 5′ to 3′ end, respectively. The 5′- and 3′-non-translated regions consist of 59 and 163 residues, respectively. The sequences of the viral proteins exhibit high identity to the proteins of the members of the genus Tobamovirus and are distinct from other viruses within the subgroup of cucurbit-infecting tobamoviruses. Results from phylogenetic trees of the coding regions demonstrated that ZGMMV is a very close relative of Kyuri green mottle mosaic virus and Cucumber fruit mottle mosaic virus and is less similar to Cucumber green mottle mosaic virus. Full-length cDNA of ZGMMV was directly amplified by reverse-transcription polymerase chain reaction (RT-PCR) using the 5′-end primer containing a T7 RNA promoter sequence and 3′-end primer. Capped in vitro transcript from the RT-PCR products was infectious on zucchini squash, cucumber, and Nicotiana benthamiana plants. This cell-free system to produce infectious transcripts from uncloned cDNA copies is useful for quick assessment of infectivity of transcripts from plant RNA viruses prior to cloning. Synthesized capped transcript from a full-length cDNA clone of the virus was highly infectious. Progeny virus derived from infectious transcripts had the same biological and biochemical properties as wild-type virus. To our knowledge, this is the first report of a biologically active transcript from a cucurbit-infecting tobamovirus.


2001 ◽  
Vol 7 (1) ◽  
Author(s):  
Patrícia V. Seabra ◽  
Eliana B. Rivas ◽  
Lígia M. Lembo Duarte ◽  
Sílvia R. Gatteti ◽  
M. Amélia V. Alexandre

Um <i>Carlavirus</i> foi associado a plantas de <i>Senna macranthera</i> apresentando porte reduzido, folhas com mosaico e manchas necróticas, além de vagens com necrose. Com círculo de hospedeiros restrito, o vírus foi mecanicamente transmitido a partir de folhas e de vagens, mas não de sementes. Ao microscópio eletrônico de transmissão observaram-se partículas alongadas, flexuosas, com cerca de 640 nm de comprimento e uma das extremidades arredondada; o exame de cortes ultrafinos revelou a presença de agregados de partículas virais no citoplasma. As propriedades “in vitro” e a presença de um só tipo de proteína no capsídeo com 30 KDa estão de acordo com o esperado para <i>Carlavirus</i>. Apesar de não ter sido possível a identificação da espécie de <i>Carlavirus</i>, os dados sugerem tratar-se de <i>Cassia mild mosaic virus</i> e o uso de espécies infectadas na ornamentação de cidades brasileiras pode constituir importante fonte de disseminação de vírus.


2021 ◽  
Vol 166 (5) ◽  
pp. 1427-1431
Author(s):  
Buyang Chen ◽  
Qi Lin ◽  
Yueyan Yin ◽  
Liangliang Jiang ◽  
Fang Wang ◽  
...  

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