scholarly journals Interpreting Null Models of Resting-State Functional MRI

2021 ◽  
Author(s):  
Raphaël Liégeois ◽  
B. T. Thomas Yeo ◽  
Dimitri Van De Ville

AbstractNull models are necessary for assessing whether a dataset exhibits non-trivial statistical properties. These models have recently gained interest in the neuroimaging community as means to explore dynamic properties of functional Magnetic Resonance Imaging (fMRI) time series. Interpretation of null-model testing in this context may not be straightforward because (i) null hypotheses associated to different null models are sometimes unclear and (ii) fMRI metrics might be ‘trivial’, i.e. preserved under the null hypothesis, and still be useful in neuroimaging applications. In this commentary, we review several commonly used null models of fMRI time series and discuss the interpretation of the corresponding tests. We argue that, while null-model testing allows for a better characterization of the statistical properties of fMRI time series and associated metrics, it should not be considered as a mandatory validation step to assess their relevance in neuroimaging applications.

NeuroImage ◽  
2006 ◽  
Vol 31 (3) ◽  
pp. 1197-1208 ◽  
Author(s):  
Thérèse Schunck ◽  
Gilles Erb ◽  
Alexandre Mathis ◽  
Christian Gilles ◽  
Izzie Jacques Namer ◽  
...  

2019 ◽  
Author(s):  
Hamid B. Turker ◽  
Elizabeth Riley ◽  
Wen-Ming Luh ◽  
Stan J. Colcombe ◽  
Khena M. Swallow

AbstractThe locus coeruleus (LC) plays a central role in regulating human cognition, arousal, and autonomic states. Efforts to characterize the LC’s function in humans using functional magnetic resonance imaging have been hampered by its small size and location near a large source of noise, the fourth ventricle. We tested whether the ability to characterize LC function is improved by employing neuromelanin-T1 weighted images (nmT1) for LC localization and multi-echo functional magnetic resonance imaging (ME-fMRI) for estimating intrinsic functional connectivity (iFC). Analyses indicated that, relative to a probabilistic atlas, utilizing nmT1 images to individually localize the LC increases the specificity of seed time series and clusters in the iFC maps. When combined with independent components analysis (ME-ICA), ME-fMRI data provided significant gains in the temporal signal to noise ratio relative to denoised single-echo (1E) data. The effects of acquiring nmT1 images and ME-fMRI data did not appear to only reflect increases in power: iFC maps for each approach only moderately overlapped. This is consistent with findings that ME-fMRI offers substantial advantages over 1E data acquisition and denoising. It also suggests that individually identifying LC with nmT1 scans is likely to reduce the influence of other nearby brainstem regions on estimates of LC function.HighlightsManual tracing of locus coeruleus increased specificity of seed time seriesManual tracing of locus coeruleus increased specificity of intrinsic connectivityMulti-echo fMRI increased temporal signal-to-noise ratio compared to single-echo fMRIConnectivity maps across methodologies overlapped only moderatelyMeasurement of LC function benefits from multi-echo fMRI and tracing ROIs


1995 ◽  
Vol 74 (3) ◽  
pp. 1192-1199 ◽  
Author(s):  
A. Puce ◽  
T. Allison ◽  
J. C. Gore ◽  
G. McCarthy

1. We have previously identified face-selective areas in the mid-fusiform and inferior temporal gyri in electrophysiological recordings made from chronically implanted subdural electrodes in epilepsy patients. In this study, functional magnetic resonance imaging (fMRI) was used to study the anatomic extent of face-sensitive brain regions and to assess hemispheric laterality. 2. A time series of 128 gradient echo echoplanar images was acquired while subjects continuously viewed an alternating series of 10 unfamiliar faces followed by 10 equiluminant scrambled faces. Each cycle of this alternating sequence lasted 12 s and each experimental run consisted of 14 cycles. The time series of each voxel was transformed into the frequency domain using Fourier analysis. Activated voxels were defined by significant peaks in their power spectra at the frequency of stimulus alternation and by a 180 degrees phase shift that followed changes in stimulus alternation order. 3. Activated voxels to faces were obtained in the fusiform and inferior temporal gyri in 9 of 12 subjects and were approximately coextensive with previously identified face-selective regions. Nine subjects also showed activation in the left or right middle occipital gyri, or in the superior temporal or lateral occipital sulci. Cortical volumes activated in the left and right hemispheres were not significantly different. Activated voxels to scrambled faces were observed in six subjects at locations mainly in the lingual gyri and collateral sulci, medial to the regions activated by faces. 4. Face stimuli activated portions of the midfusiform and inferior temporal gyri, including adjacent cortex within occipitotemporal sulci.(ABSTRACT TRUNCATED AT 250 WORDS)


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