Dicomization of LSM fluorescence composite microscopic image with its bioimaging information

2021 ◽  
Author(s):  
Yubraj Gupta ◽  
Carlos Costa ◽  
Eduardo Pinho ◽  
Luis A. Bastiao Silva ◽  
Shibarjun Mandal ◽  
...  
Keyword(s):  
Microscopic Image

Three-dimensional Reconstruction of Microscopic Image Based on Multi-ST Algorithm

2020 ◽  
Vol 64 (2) ◽  
pp. 20506-1-20506-7
Author(s):  
Min Zhu ◽  
Rongfu Zhang ◽  
Pei Ma ◽  
Xuedian Zhang ◽  
Qi Guo
Keyword(s):  
3D Reconstruction ◽  
Three Dimensional ◽  
Scale Model ◽  
Microscopic Image ◽  
Multi Scale ◽  
Gaussian Pyramid ◽  
Cost Aggregation ◽  
Dimensional Reconstruction ◽  
Image Pairs ◽  
Accurate Matching

Abstract Three-dimensional (3D) reconstruction is extensively used in microscopic applications. Reducing excessive error points and achieving accurate matching of weak texture regions have been the classical challenges for 3D microscopic vision. A Multi-ST algorithm was proposed to improve matching accuracy. The process is performed in two main stages: scaled microscopic images and regularized cost aggregation. First, microscopic image pairs with different scales were extracted according to the Gaussian pyramid criterion. Second, a novel cost aggregation approach based on the regularized multi-scale model was implemented into all scales to obtain the final cost. To evaluate the performances of the proposed Multi-ST algorithm and compare different algorithms, seven groups of images from the Middlebury dataset and four groups of experimental images obtained by a binocular microscopic system were analyzed. Disparity maps and reconstruction maps generated by the proposed approach contained more information and fewer outliers or artifacts. Furthermore, 3D reconstruction of the plug gauges using the Multi-ST algorithm showed that the error was less than 0.025 mm.

scholarly journals Microscopic image-based covariation network analysis for actin scaffold-modified insulin signaling

iScience ◽  
2021 ◽  
pp. 102724
Author(s):  
Yoshiyuki Noguchi ◽  
Fumi Kano ◽  
Nobuhiko Maiya ◽  
Chisako Iwamoto ◽  
Shoko Yamasaki ◽  
...  
Keyword(s):  
Network Analysis ◽  
Insulin Signaling ◽  
Microscopic Image

scholarly journals Deep learning-based recognition of cell structures in fluorescence microscopy sequences with respect to their morphology on cells infected with Marburg virus

2020 ◽  
Vol 6 (3) ◽  
pp. 501-504
Author(s):  
Dennis Schmidt ◽  
Andreas Rausch ◽  
Thomas Schanze
Keyword(s):  
Neural Network ◽  
Deep Learning ◽  
Infected Cell ◽  
Network Architecture ◽  
Image Sequences ◽  
Marburg Virus ◽  
Microscopic Image ◽  
Cell Structures ◽  
Fast Recognition ◽  
Subviral Particles

AbstractThe Institute of Virology at the Philipps-Universität Marburg is currently researching possible drugs to combat the Marburg virus. This involves classifying cell structures based on fluoroscopic microscopic image sequences. Conventionally, membranes of cells must be marked for better analysis, which is time consuming. In this work, an approach is presented to identify cell structures in images that are marked for subviral particles. It could be shown that there is a correlation between the distribution of subviral particles in an infected cell and the position of the cell’s structures. The segmentation is performed with a "Mask-R-CNN" algorithm, presented in this work. The model (a region-based convolutional neural network) is applied to enable a robust and fast recognition of cell structures. Furthermore, the network architecture is described. The proposed method is tested on data evaluated by experts. The results show a high potential and demonstrate that the method is suitable.

Color Reproduction Accuracy Promotion of 3D-Printed Surfaces Based on Microscopic Image Analysis

2019 ◽  
Vol 34 (01) ◽  
pp. 2054004 ◽  
Author(s):  
Xiaochun Wang ◽  
Chen Chen ◽  
Jiangping Yuan ◽  
Guangxue Chen
Keyword(s):  
Surface Roughness ◽  
Image Analysis ◽  
Three Dimensional ◽  
Prediction Method ◽  
Chromatic Aberration ◽  
Optimization Methods ◽  
Experimental Models ◽  
Microscopic Image ◽  
Color Reproduction ◽  
Microscopic Image Analysis

Full-color three-dimensional (3D) printing technology is a powerful process to manufacture intelligent customized colorful objects with improved surface qualities; however, poor surface color optimization methods are the main impeding factors for its commercialization. As such, the paper explored the correlation between microstructure and color reproduction, then an assessment and prediction method of color optimization based on microscopic image analysis was proposed. The experimental models were divided into 24-color plates and 4-color cubes printed by ProJet 860 3D printer, then impregnated according to preset parameters, at last measured by a spectrophotometer and observed using both a digital microscope and a scanning electron microscope. The results revealed that the samples manifested higher saturation and smaller chromatic aberration ([Formula: see text]) after postprocessing. Moreover, the brightness of the same color surface increased with the increasing soaked surface roughness. Further, reduction in surface roughness, impregnation into surface pores, and enhancement of coating transparency effectively improved the accuracy of color reproduction, which could be verified by the measured values. Finally, the chromatic aberration caused by positioning errors on different faces of the samples was optimized, and the value of [Formula: see text] for a black cube was reduced from 8.12 to 0.82, which is undetectable to human eyes.

Direct microscopic image and measurement of the atomization process of a port fuel injector

2010 ◽  
Vol 21 (7) ◽  
pp. 075403 ◽  
Author(s):  
Mohamed Esmail ◽  
Nobuyuki Kawahara ◽  
Eiji Tomita ◽  
Mamoru Sumida
Keyword(s):  
Microscopic Image ◽  
Fuel Injector ◽  
Atomization Process

Preliminary study of improved median filter using adaptively mask size in light microscopic image

Microscopy ◽  
2020 ◽  
Vol 69 (1) ◽  
pp. 31-36
Author(s):  
Ji-Youn Kim ◽  
Youngjin Lee
Keyword(s):  
Image Quality ◽  
Coefficient Of Variation ◽  
Signal To Noise Ratio ◽  
Median Filter ◽  
Microscopic Image ◽  
Signal To Noise ◽  
Mask Size ◽  
Preliminary Study ◽  
Noise Ratio ◽  
Image Details

Abstract This study aimed to develop and evaluate an improved median filter (IMF) with an adaptive mask size for light microscope (LM) images. We acquired images of the mouse first molar using a LM at 100× magnification. The images obtained using our proposed IMF were compared with those from a conventional median filter. Several parameters such as the contrast-to-noise ratio, coefficient of variation, no-reference assessments and peak signal-to-noise ratio were employed to evaluate the image quality quantitatively. The results demonstrated that the proposed IMF could effectively de-noise the LM images and preserve the image details, achieving a better performance than the conventional median filter.

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