Semi-supervised Support Vector Data Description Multi-classification Learning Algorithm

Author(s):  
Huang Xiantong ◽  
Zhang Songjuan
2011 ◽  
Vol 268-270 ◽  
pp. 1115-1120
Author(s):  
De Qian Xue

Semi-supervised Support Vector Data Description multi-classification algorithm is presented, in order to solve less labeled data learning, difficulties in the implementation and poor results of semi-supervised multi-classification, which full use the distribution of information in of non-target samples. S3VDD-MC algorithm defines the degree of membership of non-target samples, in order to get the non-target samples’ accepted labels or refused labels, on this basis, several super-spheres constructed, a k-classification problem is transformed into k SVDDs problem. Finally, the simulation results verify the effectiveness of the algorithm.


2020 ◽  
Vol 15 ◽  
Author(s):  
Yi Zou ◽  
Hongjie Wu ◽  
Xiaoyi Guo ◽  
Li Peng ◽  
Yijie Ding ◽  
...  

Background: Detecting DNA-binding proetins (DBPs) based on biological and chemical methods is time consuming and expensive. Objective: In recent years, the rise of computational biology methods based on Machine Learning (ML) has greatly improved the detection efficiency of DBPs. Method: In this study, Multiple Kernel-based Fuzzy SVM Model with Support Vector Data Description (MK-FSVM-SVDD) is proposed to predict DBPs. Firstly, sex features are extracted from protein sequence. Secondly, multiple kernels are constructed via these sequence feature. Than, multiple kernels are integrated by Centered Kernel Alignment-based Multiple Kernel Learning (CKA-MKL). Next, fuzzy membership scores of training samples are calculated with Support Vector Data Description (SVDD). FSVM is trained and employed to detect new DBPs. Results: Our model is test on several benchmark datasets. Compared with other methods, MK-FSVM-SVDD achieves best Matthew's Correlation Coefficient (MCC) on PDB186 (0.7250) and PDB2272 (0.5476). Conclusion: We can conclude that MK-FSVM-SVDD is more suitable than common SVM, as the classifier for DNA-binding proteins identification.


2021 ◽  
Author(s):  
JianXi Yang ◽  
Fei Yang ◽  
Likai Zhang ◽  
Ren Li ◽  
Shixin Jiang ◽  
...  

Sign in / Sign up

Export Citation Format

Share Document