Choosing the Optimal Hidden Markov Model for Secondary-Structure Prediction

IEEE Intelligent Systems ◽

10.1109/mis.2005.102 ◽

2005 ◽

Vol 20 (6) ◽

pp. 19-25 ◽

Author(s):

J. Martin ◽

J. Gibrat ◽

F. Rodolphe

Keyword(s):

Secondary Structure ◽

Markov Model ◽

Hidden Markov Model ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

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PRT-HMM: A Novel Hidden Markov Model for Protein Secondary Structure Prediction

2012 IEEE/ACIS 11th International Conference on Computer and Information Science ◽

10.1109/icis.2012.89 ◽

2012 ◽

Author(s):

Wang Ding ◽

Dongbo Dai ◽

Jiang Xie ◽

Huiran Zhang ◽

Wu Zhang ◽

...

Keyword(s):

Secondary Structure ◽

Markov Model ◽

Hidden Markov Model ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Hidden Markov ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction

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A Modified Hidden Markov Model and Its Application in Protein Secondary Structure Prediction

Journal of Proteomics & Bioinformatics ◽

10.4172/jpb.1000209 ◽

2012 ◽

Vol 05 (01) ◽

Author(s):

Sima Naghizadeh ◽

Vahid Rezaeitabar ◽

Hamid Pezeshk

Keyword(s):

Secondary Structure ◽

Markov Model ◽

Hidden Markov Model ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Hidden Markov ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction

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A modified bidirectional hidden Markov model and its application in protein secondary structure prediction

2010 2nd International Conference on Advanced Computer Control ◽

10.1109/icacc.2010.5487140 ◽

2010 ◽

Author(s):

Hamid Pezeshk ◽

S Naghizadeh ◽

S A Malekpour ◽

C Eslahchi ◽

M Sadeghi

Keyword(s):

Secondary Structure ◽

Markov Model ◽

Hidden Markov Model ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Hidden Markov ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction

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A Composite Approach to Protein Tertiary Structure Prediction: Hidden Markov Model Based on Lattice

Bulletin of Mathematical Biology ◽

10.1007/s11538-018-00542-4 ◽

2018 ◽

Vol 81 (3) ◽

pp. 899-918 ◽

Author(s):

Farzad Peyravi ◽

Alimohammad Latif ◽

Seyed Mohammad Moshtaghioun

Keyword(s):

Markov Model ◽

Hidden Markov Model ◽

Structure Prediction ◽

Tertiary Structure ◽

Hidden Markov ◽

Tertiary Structure Prediction ◽

Protein Tertiary Structure ◽

Model Based ◽

Composite Approach ◽

Protein Tertiary Structure Prediction

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Protein secondary structure prediction using three neural networks and a segmental semi Markov model

Mathematical Biosciences ◽

10.1016/j.mbs.2008.11.001 ◽

2009 ◽

Vol 217 (2) ◽

pp. 145-150 ◽

Author(s):

Seyed Amir Malekpour ◽

Sima Naghizadeh ◽

Hamid Pezeshk ◽

Mehdi Sadeghi ◽

Changiz Eslahchi

Keyword(s):

Neural Networks ◽

Secondary Structure ◽

Markov Model ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction

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Methods for Protein Structure Prediction and Its Application in Drug Design Using Hidden Markov Model

INTERNATIONAL JOURNAL OF EMERGING TRENDS IN SCIENCE AND TECHNOLOGY ◽

10.18535/ijetst/v3i03.09 ◽

2016 ◽

Author(s):

Nidhi Katiyar ◽

Keyword(s):

Protein Structure ◽

Drug Design ◽

Markov Model ◽

Hidden Markov Model ◽

Protein Structure Prediction ◽

Structure Prediction ◽

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Prediction of protein secondary structure by the hidden Markov model

Bioinformatics ◽

10.1093/bioinformatics/9.2.141 ◽

1993 ◽

Vol 9 (2) ◽

pp. 141-146 ◽

Author(s):

Kiyoshi Asai ◽

Satoru Hayamizu ◽

Ken'ichi Handa

Keyword(s):

Secondary Structure ◽

Markov Model ◽

Hidden Markov Model ◽

Hidden Markov ◽

Protein Secondary Structure

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Sequence-based protein structure prediction using a reduced state-space hidden Markov model

Computers in Biology and Medicine ◽

10.1016/j.compbiomed.2006.10.014 ◽

2007 ◽

Vol 37 (9) ◽

pp. 1211-1224 ◽

Author(s):

Christos Lampros ◽

Costas Papaloukas ◽

Themis P. Exarchos ◽

Yorgos Goletsis ◽

Dimitrios I. Fotiadis

Keyword(s):

Protein Structure ◽

Markov Model ◽

Hidden Markov Model ◽

State Space ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Hidden Markov ◽

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Hidden Markov Models and Protein Secondary Structure Prediction

Bioinformatics and the Cell ◽

10.1007/978-3-319-90684-3_7 ◽

2018 ◽

pp. 145-172

Author(s):

Xuhua Xia

Keyword(s):

Secondary Structure ◽

Hidden Markov Models ◽

Structure Prediction ◽

Markov Models ◽

Secondary Structure Prediction ◽

Hidden Markov ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction

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Improvement in Fold Recognition Accuracy of a Reduced-State-Space Hidden Markov Model by using Secondary Structure Information in Scoring

2007 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society ◽

10.1109/iembs.2007.4353466 ◽

2007 ◽

Author(s):

Christos Lampros ◽

Costas Papaloukas ◽

Kostas Exarchos ◽

Dimitrios I. Fotiadis

Keyword(s):

Secondary Structure ◽

Markov Model ◽

Hidden Markov Model ◽

State Space ◽

Recognition Accuracy ◽

Hidden Markov ◽

Fold Recognition ◽

Secondary Structure Information ◽

Structure Information ◽

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