scholarly journals One Shot Model For COVID-19 Classification and Lesions Segmentation In Chest CT Scans Using LSTM With Attention Mechanism

2022 ◽  
pp. 1-1
Author(s):  
Aram Ter-Sarkisov
2021 ◽  
Author(s):  
Aram Ter-Sarkisov

Abstract We present a model that fuses instance segmentation, Long Short-Term Memory Network and Attention mechanism to predict COVID-19 and segment chest CT scans. The model works by extracting a sequence of Regions of Interest that contain class-relevant information, and applies two Long Short-Term Memory networks with attention to this sequence to extract class-relevant features. The model is trained in one shot: both segmentation and classification branches, using two different sets of data. We achieve a 95.74% COVID-19 sensitivity, 98.13% Common Pneumonia sensitivity, 99.27% Control sensitivity and 98.15% class-adjusted F1 score on the main dataset of 21191 chest CT scan slices, and also run a number of ablation studies in which we achieve 97.73% COVID-19 sensitivity and 98.41% F1 score. All source code and models are available on https://github.com/AlexTS1980/COVID-LSTM-Attention.


2021 ◽  
Author(s):  
Aram Ter-Sarkisov

AbstractWe present a model that fuses instance segmentation, Long Short-Term Memory Network and Attention mechanism to predict COVID-19 and segment chest CT scans. The model works by extracting a sequence of Regions of Interest that contain class-relevant information, and applies two Long Short-Term Memory networks with attention to this sequence to extract class-relevant features. The model is trained in one shot: both segmentation and classification branches, using two different sets of data. We achieve a 95.74% COVID-19 sensitivity, 98.13% Common Pneumonia sensitivity, 99.27% Control sensitivity and 98.15% class-adjusted F1 score on the main dataset of 21191 chest CT scan slices, and also run a number of ablation studies in which we achieve 97.73% COVID-19 sensitivity and 98.41% F1 score. All source code and models are available on https://github.com/AlexTS1980/COVID-LSTM-Attention.


Author(s):  
Martina Pecoraro ◽  
Stefano Cipollari ◽  
Livia Marchitelli ◽  
Emanuele Messina ◽  
Maurizio Del Monte ◽  
...  

Abstract Purpose The aim of the study was to prospectively evaluate the agreement between chest magnetic resonance imaging (MRI) and computed tomography (CT) and to assess the diagnostic performance of chest MRI relative to that of CT during the follow-up of patients recovered from coronavirus disease 2019. Materials and methods Fifty-two patients underwent both follow-up chest CT and MRI scans, evaluated for ground-glass opacities (GGOs), consolidation, interlobular septal thickening, fibrosis, pleural indentation, vessel enlargement, bronchiolar ectasia, and changes compared to prior CT scans. DWI/ADC was evaluated for signal abnormalities suspicious for inflammation. Agreement between CT and MRI was assessed with Cohen’s k and weighted k. Measures of diagnostic accuracy of MRI were calculated. Results The agreement between CT and MRI was almost perfect for consolidation (k = 1.00) and change from prior CT (k = 0.857); substantial for predominant pattern (k = 0.764) and interlobular septal thickening (k = 0.734); and poor for GGOs (k = 0.339), fibrosis (k = 0.224), pleural indentation (k = 0.231), and vessel enlargement (k = 0.339). Meanwhile, the sensitivity of MRI was high for GGOs (1.00), interlobular septal thickening (1.00), and consolidation (1.00) but poor for fibrotic changes (0.18), pleural indentation (0.23), and vessel enlargement (0.50) and the specificity was overall high. DWI was positive in 46.0% of cases. Conclusions The agreement between MRI and CT was overall good. MRI was very sensitive for GGOs, consolidation and interlobular septal thickening and overall specific for most findings. DWI could be a reputable imaging biomarker of inflammatory activity.


Author(s):  
Tanvir Mahmud ◽  
Md Awsafur Rahman ◽  
Shaikh Anowarul Anowarul Fattah ◽  
Sun-Yuan Kung

IEEE Access ◽  
2021 ◽  
pp. 1-1
Author(s):  
Hessam Sokooti ◽  
Sahar Yousefi ◽  
Mohamed S. Elmahdy ◽  
Boudewijn P.F. Lelieveldt ◽  
Marius Staring
Keyword(s):  
Chest Ct ◽  
Ct Scans ◽  

Author(s):  
Vlad Vasilescu ◽  
Ana Neacsu ◽  
Emilie Chouzenoux ◽  
Jean-Christophe Pesquet ◽  
Corneliu Burileanu

CHEST Journal ◽  
1995 ◽  
Vol 107 (1) ◽  
pp. 113-115 ◽  
Author(s):  
Brigitte A.H.A. Van der Bruggen-Bogaarts ◽  
Johan J. Broerse ◽  
Jan-Willem J. Lammers ◽  
Paul F.G.M. Van Waes ◽  
Jacob Geleijns

2021 ◽  
pp. 100709
Author(s):  
Md. Kamrul Hasan ◽  
Md. Tasnim Jawad ◽  
Kazi Nasim Imtiaz Hasan ◽  
Sajal Basak Partha ◽  
Md. Masum Al Masba ◽  
...  
Keyword(s):  
Chest Ct ◽  
Ct Scans ◽  

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