Cross-Intensity-Based Spatial-Temporal Clustering of Spike Trains for Brain State Estimation*

Author(s):  
Yifan Huang ◽  
Cunle Qian ◽  
Xiang Zhang ◽  
Yiwen Wang
2020 ◽  
Vol 131 (4) ◽  
pp. e35-e36
Author(s):  
J. Metsomaa ◽  
C. Zrenner ◽  
P. Belardinelli ◽  
M. Ermolova ◽  
P. Gordon ◽  
...  

2020 ◽  
Author(s):  
Michael Paulin ◽  
Kiri Pullar ◽  
Larry Hoffman

AbstractUsing an information criterion to evaluate models fitted to spike train data from chinchilla semicircular canal afferent neurons, we found that the superficially complex functional organization of the canal nerve branch can be accurately quantified in an elegant mathematical model with only three free parameters. Spontaneous spike trains are samples from stationary renewal processes whose interval distributions are Exwald distributions, convolutions of Inverse Gaussian and Exponential distributions. We show that a neuronal membrane compartment is a natural computer for calculating parameter likelihoods given samples from a point process with such a distribution, which may facilitate fast, accurate, efficient Bayesian neural computation for estimating the kinematic state of the head. The model suggests that Bayesian neural computation is an aspect of a more general principle that has driven the evolution of nervous system design, the energy efficiency of biological information processing.Significance StatementNervous systems ought to have evolved to be Bayesian, because Bayesian inference allows statistically optimal evidence-based decisions and actions. A variety of circumstantial evidence suggests that animal nervous systems are indeed capable of Bayesian inference, but it is unclear how they could do this. We have identified a simple, accurate generative model of vestibular semicircular canal afferent neuron spike trains. If the brain is a Bayesian observer and a Bayes-optimal decision maker, then the initial stage of processing vestibular information must be to compute the posterior density of head kinematic state given sense data of this form. The model suggests how neurons could do this. Head kinematic state estimation given point-process inertial data is a well-defined dynamical inference problem whose solution formed a foundation for vertebrate brain evolution. The new model provides a foundation for developing realistic, testable spiking neuron models of dynamical state estimation in the vestibulo-cerebellum, and other parts of the Bayesian brain.


eLife ◽  
2015 ◽  
Vol 4 ◽  
Author(s):  
Samuel Andrew Hires ◽  
Diego A Gutnisky ◽  
Jianing Yu ◽  
Daniel H O'Connor ◽  
Karel Svoboda

Cortical spike trains often appear noisy, with the timing and number of spikes varying across repetitions of stimuli. Spiking variability can arise from internal (behavioral state, unreliable neurons, or chaotic dynamics in neural circuits) and external (uncontrolled behavior or sensory stimuli) sources. The amount of irreducible internal noise in spike trains, an important constraint on models of cortical networks, has been difficult to estimate, since behavior and brain state must be precisely controlled or tracked. We recorded from excitatory barrel cortex neurons in layer 4 during active behavior, where mice control tactile input through learned whisker movements. Touch was the dominant sensorimotor feature, with >70% spikes occurring in millisecond timescale epochs after touch onset. The variance of touch responses was smaller than expected from Poisson processes, often reaching the theoretical minimum. Layer 4 spike trains thus reflect the millisecond-timescale structure of tactile input with little noise.


2012 ◽  
Vol 22 (1) ◽  
pp. 13-21 ◽  
Author(s):  
MARIA M. ARNOLD ◽  
JANUSZ SZCZEPANSKI ◽  
NOELIA MONTEJO ◽  
JOSÉ M. AMIGÓ ◽  
ELIGIUSZ WAJNRYB ◽  
...  

1996 ◽  
Vol 19 (2) ◽  
pp. 307-308 ◽  
Author(s):  
Hubert Preissl ◽  
Werner Lutzenberger ◽  
Friedemann Pulvermüller

AbstractFor some years there has been a controversy about whether brain state variables such as EEG or neuronal spike trains exhibit chaotic behaviour. Wright & Liley claim that the local dynamics measured by spike trains or local field potentials exhibit chaotic behaviour, but global measures like EEG should be governed by linear dynamics. We propose a different scheme. Based on simulation studies and various experiments, we suggest that the pointwise dimension of EEG time series may provide some valuable information about underlying neuronal generators.


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