scholarly journals Genetic and physiological analysis of the relationship between partial resistance to clubroot and tolerance to trehalose in Arabidopsis thaliana

2011 ◽  
Vol 191 (4) ◽  
pp. 1083-1094 ◽  
Author(s):  
Antoine Gravot ◽  
Louis Grillet ◽  
Geoffrey Wagner ◽  
Mélanie Jubault ◽  
Christine Lariagon ◽  
...  
2015 ◽  
Vol 29 ◽  
pp. 296-297
Author(s):  
Geeta Prasad ◽  
Guillermina Mendiondo ◽  
Jorge V. Conde ◽  
Cristina Sousa Correia ◽  
M.J. Holdsworth

1998 ◽  
Vol 153 (3-4) ◽  
pp. 446-456 ◽  
Author(s):  
Slobodanka Grsic ◽  
Sylvia Sauerteig ◽  
Klaus Neuhaus ◽  
Manuela Albrecht ◽  
John Rossiter ◽  
...  

1991 ◽  
Vol 229 (1) ◽  
pp. 57-66 ◽  
Author(s):  
M. Koornneef ◽  
C. J. Hanhart ◽  
J. H. van der Veen

PLoS ONE ◽  
2006 ◽  
Vol 1 (1) ◽  
pp. e123 ◽  
Author(s):  
Laure Perchepied ◽  
Thomas Kroj ◽  
Maurice Tronchet ◽  
Olivier Loudet ◽  
Dominique Roby

Plant Methods ◽  
2013 ◽  
Vol 9 (1) ◽  
pp. 4 ◽  
Author(s):  
Simon J Conn ◽  
Bradleigh Hocking ◽  
Maclin Dayod ◽  
Bo Xu ◽  
Asmini Athman ◽  
...  

2021 ◽  
Author(s):  
Akira S. Hirao ◽  
Yoshito Watanabe ◽  
Yoichi Hasegawa ◽  
Toshihito Takagi ◽  
Saneyoshi Ueno ◽  
...  

ABSTRACTEarth has always been exposed to ionizing radiation from natural sources, and man-made sources have added to this radiation. In order to assess mutational effects of ubiquitously present radiation on plants, we performed a whole-genome resequencing analysis of mutations induced by chronic irradiation throughout the life-cycle of Arabidopsis thaliana under controlled conditions. Resequencing data from 12 M1 lines and 36 M2 progeny derived under gamma-irradiation conditions ranging from 0.0 to 2.0 Gy/d were obtained to identify de novo mutations, including single base substitutions (SBSs) and small insertions/deletions (INDELs). The relationship between de novo mutation frequency and a low-to-middling dose of radiation was assessed by statistical modeling. The increasing of de novo mutations in response to doses of irradiation fit the negative binomial model, accounting for the high variability of mutation frequency observed. Among the different types of mutations, SBSs were more prevalent than INDELs, with deletions being more frequent than insertions. Furthermore, we observed that the mutational effects of chronic radiation are more intensive during the reproductive stage. These outcomes could provide valuable insights into practical strategies for environmental radioprotection of plants on Earth and in space.


Plants ◽  
2019 ◽  
Vol 8 (12) ◽  
pp. 531 ◽  
Author(s):  
Giulio Testone ◽  
Elena Baldoni ◽  
Maria Adelaide Iannelli ◽  
Chiara Nicolodi ◽  
Elisabetta Di Giacomo ◽  
...  

Cichorium endivia is a leafy crop closely related to Lactuca sativa that comprises two major botanical varieties characterized by a high degree of intraspecific morphological variation: var. latifolium with broad leaves (escarole) and var. crispum with narrow crisp curly leaves (endive). To investigate the relationship between leaf morphology and photosynthetic activity, escaroles and endives were used as a crop model due to the striking morphological diversity of their leaves. We constructed a leaf database for transcription factors (TFs) and photosynthesis-related genes from a refined C. endivia transcriptome and used RNA-seq transcriptomic data from leaves of four commercial endive and escarole cultivars to explore transcription factor regulatory networks. Cluster and gene co-expression network (GCN) analyses identified two main anticorrelated modules that control photosynthesis. Analysis of the GCN network topological properties identified known and novel hub genes controlling photosynthesis, and candidate developmental genes at the boundaries between shape and function. Differential expression analysis between broad and curly leaves suggested three novel TFs putatively involved in leaf shape diversity. Physiological analysis of the photosynthesis properties and gene expression studies on broad and curly leaves provided new insights into the relationship between leaf shape and function.


1996 ◽  
Vol 23 (4) ◽  
pp. 453 ◽  
Author(s):  
RM Chapple ◽  
AM Chaudhury ◽  
KC Blomer ◽  
LB Farrell ◽  
ES Dennis

The ms1 mutation of Arabidopsis thaliana causes male sterility by preventing the development of normal microspores in the developing anther. The gene is located on a region of chromosome 5 containing the RFLP markers g4111, g4560 and g21503. Using yeast artificial chromosome (YAC) libraries, we have constructed a contig of 38 YACs spanning approximately 2.1 megabases (approximately 2% of the genome) around MS1 and redefined the order of these RFLP markers. Chimeric YACs and repetitive DNA caused problems in chromosome 'walking'. A method for cloning YAC right ends by plasmid rescue was applied to arabidopsis. One YAC end contained a portion of the A. thaliana sucrose synthase gene ASUSI, hence locating this gene on chromosome 5 near MS1. Using recombinant plant populations containing ms1 and flanking markers, MS1 was localised to a 200 kb region within the YAC contig. In this contig the relationship between physical and genetic distance varied from less than 100 kb to 720 kb per centimorgan.


Author(s):  
Miho Yasumori ◽  
Kyotaro Noguchi ◽  
Mitsuo Chino ◽  
Hiroaki Hayashi ◽  
Satoshi Naito ◽  
...  

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