scholarly journals Community analysis of ammonia-oxidising bacteria, in relation to oxygen availability in soils and root-oxygenated sediments, using PCR, DGGE and oligonucleotide probe hybridisation

1998 ◽  
Vol 27 (4) ◽  
pp. 339-350 ◽  
Author(s):  
George A. Kowalchuk ◽  
Paul L.E. Bodelier ◽  
G.Hans J. Heilig ◽  
John R. Stephen ◽  
Hendrikus J. Laanbroek
Keyword(s):  
Oligonucleotide Probe ◽  
Community Analysis ◽  
Oxygen Availability ◽  
Ammonia Oxidising Bacteria

Assessing the ecosystem impact of scallop bottom culture through a community analysis and trophic modelling approach

2016 ◽  
Vol 547 ◽  
pp. 121-135 ◽  
Author(s):  
LC Kluger ◽  
MH Taylor ◽  
E Barriga Rivera ◽  
E Torres Silva ◽  
M Wolff
Keyword(s):  
Community Analysis ◽  
Bottom Culture ◽  
Modelling Approach

Phylogenetic assessment of five filamentous bacteria isolated from bulking activated sludges

1998 ◽  
Vol 37 (4-5) ◽  
pp. 303-306 ◽  
Author(s):  
R. Howarth ◽  
I. M. Head ◽  
R. F. Unz
Keyword(s):  
Ribosomal Rna ◽  
Oligonucleotide Probe ◽  
Strong Relationship ◽  
Bootstrap Support ◽  
Its Sequence ◽  
Target Sequence ◽  
Common Ancestry ◽  
Filamentous Bacteria ◽  
Axenic Strains ◽  
Rrna Sequences

Nearly complete 16S ribosomal RNA (rRNA) sequences were determined for fully characterised axenic strains of Thiothrix, Eikelboom type O21N, and Eikelboom type 1701 originally isolated from bulking activated sludges. Thiothrix strains formed a monophyletic group (100% bootstrap support) with previously described Thiothrix nivea strain JP2 and Thiothrix ramosa. Eikelboom type O21N strain AP3 revealed a sufficiently strong relationship to the Thiothrix group to suggest a common ancestry for the two organism although it was not possible to designate type 021N as a species of Thiothrix. Eikelboom type 1701 contained within its sequence the target sequence of an oligonucleotide probe for the detection of Sphaerotilus natans.

BACTERIAL COMMUNITY ANALYSIS AS A METHOD TO TRACK SURFACE WATER PERTURBATION TO GROUNDWATER

2016 ◽  
Author(s):  
Jennifer C. Underwood ◽  
◽  
Ronald W. Harvey ◽  
David W. Metge ◽  
Denis R. LeBlanc
Keyword(s):  
Surface Water ◽  
Bacterial Community ◽  
Community Analysis ◽  
Track Surface

USE OF BACTERIA COMMUNITY ANALYSIS AND DISCRETE GROUNDWATER SAMPLING TO IMPROVE HYDROGEOLOGIC CHARACTERIZATIONS

2020 ◽  
Author(s):  
Mark Higgins ◽  
◽  
Gary A. Robbins ◽  
Meredith J. Metcalf ◽  
Edwin Romanowicz ◽  
...  
Keyword(s):  
Community Analysis ◽  
Groundwater Sampling
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