Fire alters plant microbiome assembly patterns: integrating the plant and soil microbial response to disturbance

Soil microbial response to silicate fertilization reduces bioavailable arsenic in contaminated paddies

Soil Biology and Biochemistry ◽

10.1016/j.soilbio.2021.108307 ◽

2021 ◽

pp. 108307

Author(s):

Suvendu Das ◽

Hyun Young Hwang ◽

Hyeon Ji Song ◽

Song Rae Cho ◽

Joy D. Van Nostrand ◽

...

Keyword(s):

Soil Microbial ◽

Microbial Response

Plant residue chemical quality modulates the soil microbial response related to decomposition and soil organic carbon and nitrogen stabilization in a rainfed Mediterranean agroecosystem

Soil Biology and Biochemistry ◽

10.1016/j.soilbio.2021.108198 ◽

2021 ◽

pp. 108198

Author(s):

María Almagro ◽

Antonio Ruiz-Navarro ◽

Elvira Díaz-Pereira ◽

Juan Albaladejo ◽

María Martínez-Mena

Keyword(s):

Organic Carbon ◽

Soil Organic Carbon ◽

Plant Residue ◽

Chemical Quality ◽

Carbon And Nitrogen ◽

Soil Microbial ◽

Microbial Response

Soil microbial response during the phytoremediation of a PAH contaminated soil

Soil Biology and Biochemistry ◽

10.1016/j.soilbio.2005.04.001 ◽

2005 ◽

Vol 37 (12) ◽

pp. 2334-2336 ◽

Cited By ~ 79

Author(s):

D JOHNSON ◽

D ANDERSON ◽

S MCGRATH

Keyword(s):

Contaminated Soil ◽

Soil Microbial ◽

Microbial Response

Competition for nitrogen during mineralization of plant residues in soil: Microbial response to C and N availability

Soil Biology and Biochemistry ◽

10.1016/s0038-0717(96)00292-1 ◽

1997 ◽

Vol 29 (2) ◽

pp. 163-170 ◽

Cited By ~ 70

Author(s):

Wang Jingguo ◽

Lars R. Bakken

Keyword(s):

Plant Residues ◽

N Availability ◽

Soil Microbial ◽

Microbial Response ◽

C And N

A simple pyrocosm for studying soil microbial response to fire reveals a rapid, massive response by Pyronema species

PLoS ONE ◽

10.1371/journal.pone.0222691 ◽

2020 ◽

Vol 15 (3) ◽

pp. e0222691 ◽

Cited By ~ 1

Author(s):

Thomas D. Bruns ◽

Judy A. Chung ◽

Akiko A. Carver ◽

Sydney I. Glassman

Keyword(s):

Soil Microbial ◽

Microbial Response

Changes in soil microbial response across year following a wildfire in tropical dry forest

Forest Ecology and Management ◽

10.1016/j.foreco.2017.02.042 ◽

2017 ◽

Vol 391 ◽

pp. 458-468 ◽

Cited By ~ 14

Author(s):

Ashutosh Kumar Singh ◽

Meenakshi Kushwaha ◽

Apurva Rai ◽

Nandita Singh

Keyword(s):

Tropical Dry Forest ◽

Dry Forest ◽

Soil Microbial ◽

Microbial Response

Soil microbial response to herbicides applied to glyphosate-resistant canola

Agriculture Ecosystems & Environment ◽

10.1016/j.agee.2008.08.007 ◽

2009 ◽

Vol 129 (1-3) ◽

pp. 171-176 ◽

Cited By ~ 29

Author(s):

N.Z. Lupwayi ◽

K.N. Harker ◽

G.W. Clayton ◽

J.T. O’Donovan ◽

R.E. Blackshaw

Keyword(s):

Soil Microbial ◽

Microbial Response

Invasive plant species and soil microbial response to wildfire burn severity in the Cascade Range of Oregon

Applied Soil Ecology ◽

10.1016/j.apsoil.2009.03.004 ◽

2009 ◽

Vol 42 (2) ◽

pp. 150-159 ◽

Cited By ~ 39

Author(s):

Cassie L. Hebel ◽

Jane E. Smith ◽

Kermit Cromack

Keyword(s):

Plant Species ◽

Invasive Plant ◽

Cascade Range ◽

Burn Severity ◽

Invasive Plant Species ◽

Soil Microbial ◽

Microbial Response

Protective Effect of Soil Microbial Response Due to Organic Substance Addition in Radical Phytopaties

Zentralblatt für Mikrobiologie ◽

10.1016/s0232-4393(11)80278-7 ◽

1990 ◽

Vol 145 (8) ◽

pp. 593-598 ◽

Cited By ~ 1

Author(s):

Carlo Filippi ◽

Giovanna Bagnoli ◽

Barbara Citterio

Keyword(s):

Protective Effect ◽

Organic Substance ◽

Soil Microbial ◽

Microbial Response

Disease-induced Changes in Plant Microbiome Assembly and Functional Adaptation

10.21203/rs.3.rs-113338/v1 ◽

2020 ◽

Author(s):

Min Gao ◽

Chao Xiong ◽

Cheng Gao ◽

Clement K.M. Tsui ◽

Xin Zhou ◽

...

Keyword(s):

Pathogenic Fungi ◽

Reproductive Organ ◽

Functional Adaptation ◽

Diseased Plant ◽

Critical Data ◽

Genes Encoding ◽

Ecological Importance ◽

Occurrence Patterns ◽

Microbiome Assembly ◽

Plant Microbiome

Abstract Background: Plant microbiome is an integral part of the host influencing its growth and health. The increasing evidence indicates that plant rhizosphere may recruit beneficial microbes to suppress soil-borne pathogen, but the ecological mechanisms that govern plant microbiome assembly and functions under disease in both below and aboveground compartments are not fully understood. Here we examined both bacterial and fungal communities from soils (rhizosphere and bulk soil) and multiple plant compartments (e.g. root, stem, and fruit) of chili pepper (Capsicum annuum L.) at two pepper production sites, and explored how Fusarium wilt disease (FWD) affect the assembly, co-occurrence patterns, and ecological functions of plant-associated microbiomes. Results: Our data demonstrated that FWD had less impact on reproductive organ (fruit) than on vegetative organs (root and stem), with the strongest impact in the stem upper epidermis. Fungal intra-kingdom networks presented lower stabilities and their communities were more sensitive to FWD than the bacterial communities. Moreover, the diseased pepper was more susceptible to colonization by other pathogenic fungi, but they may recruit potential beneficial bacteria to facilitate host or offspring survival, and FWD may enhance the ecological importance of fungal taxa in the interkingdom network. Further, metagenomic analysis revealed that several potential protective functional genes encoding detoxify and biofilm formation were significantly enriched in the diseased pepper.Conclusion: Together, these results significantly advance our understanding of pepper microbiome assembly and functions under biotic stress. Our work highlights the diseased plant and the aboveground compartments harbor a potential of beneficial microbiomes and functions that, in concert, can provide potential critical data for harnessing the plant microbiome for sustainable agriculture.