scholarly journals Functional Characterization of LIKE HETEROCHROMATIN PROTEIN 1 in the moss Physcomitrella patens : its conserved protein interactions in land plants

Author(s):  
Vimala Parihar ◽  
Deepshikha Arya ◽  
Akanksha Walia ◽  
Vidhi Tyagi ◽  
Meenakshi Dangwal ◽  
...  
2020 ◽  
Vol 10 ◽  
Author(s):  
Tran Le Cong Huyen Bao Phan ◽  
Ines Delorge ◽  
Nelson Avonce ◽  
Patrick Van Dijck

2018 ◽  
Vol 30 (6) ◽  
pp. 1293-1308 ◽  
Author(s):  
Alison W. Roberts ◽  
Jelle Lahnstein ◽  
Yves S.Y. Hsieh ◽  
Xiaohui Xing ◽  
Kuok Yap ◽  
...  

2012 ◽  
Vol 448 (1) ◽  
pp. 55-65 ◽  
Author(s):  
Jonas Boehringer ◽  
Christiane Riedinger ◽  
Konstantinos Paraskevopoulos ◽  
Eachan O. D. Johnson ◽  
Edward D. Lowe ◽  
...  

The ubiquitin–proteasome system targets selected proteins for degradation by the 26S proteasome. Rpn12 is an essential component of the 19S regulatory particle and plays a role in recruiting the extrinsic ubiquitin receptor Rpn10. In the present paper we report the crystal structure of Rpn12, a proteasomal PCI-domain-containing protein. The structure helps to define a core structural motif for the PCI domain and identifies potential sites through which Rpn12 might form protein–protein interactions. We demonstrate that mutating residues at one of these sites impairs Rpn12 binding to Rpn10 in vitro and reduces Rpn10 incorporation into proteasomes in vivo.


2017 ◽  
Vol 29 (2) ◽  
pp. 310-330 ◽  
Author(s):  
Anja Possart ◽  
Tengfei Xu ◽  
Inyup Paik ◽  
Sebastian Hanke ◽  
Sarah Keim ◽  
...  

FEBS Letters ◽  
2019 ◽  
Vol 593 (18) ◽  
pp. 2686-2697
Author(s):  
Vimala Parihar ◽  
Meenakshi Dangwal ◽  
Deepshikha Arya ◽  
Sanjay Kapoor ◽  
Meenu Kapoor

Vaccines ◽  
2020 ◽  
Vol 8 (1) ◽  
pp. 77 ◽  
Author(s):  
Sara Artigas-Jerónimo ◽  
Juan Pastor Comín ◽  
Margarita Villar ◽  
Marinela Contreras ◽  
Pilar Alberdi ◽  
...  

The main objective of this study was to propose a novel methodology to approach challenges in molecular biology. Akirin/Subolesin (AKR/SUB) are vaccine protective antigens and are a model for the study of the interactome due to its conserved function in the regulation of different biological processes such as immunity and development throughout the metazoan. Herein, three visual artists and a music professor collaborated with scientists for the functional characterization of the AKR2 interactome in the regulation of the NF-κB pathway in human placenta cells. The results served as a methodological proof-of-concept to advance this research area. The results showed new perspectives on unexplored characteristics of AKR2 with functional implications. These results included protein dimerization, the physical interactions with different proteins simultaneously to regulate various biological processes defined by cell type-specific AKR–protein interactions, and how these interactions positively or negatively regulate the nuclear factor kappa-light-chain-enhancer of activated B cells (NF-κB) signaling pathway in a biological context-dependent manner. These results suggested that AKR2-interacting proteins might constitute suitable secondary transcription factors for cell- and stimulus-specific regulation of NF-κB. Musical perspective supported AKR/SUB evolutionary conservation in different species and provided new mechanistic insights into the AKR2 interactome. The combined scientific and artistic perspectives resulted in a multidisciplinary approach, advancing our knowledge on AKR/SUB interactome, and provided new insights into the function of AKR2–protein interactions in the regulation of the NF-κB pathway. Additionally, herein we proposed an algorithm for quantum vaccinomics by focusing on the model proteins AKR/SUB.


Sign in / Sign up

Export Citation Format

Share Document