scholarly journals Draft Genome Sequence of Clostridium sp. Strain chh4-2 Isolated from Human Feces

2018 ◽  
Vol 6 (8) ◽  
Author(s):  
Chien-Hsun Huang ◽  
Jong-Shian Liou ◽  
Chun-Lin Wang ◽  
Lina Huang
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Genome Assembly ◽  
Fecal Sample ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome ◽  
Human Feces ◽  
Content Type ◽  
Old Adult

ABSTRACT Here, we report the draft genome sequence of a Clostridium sp. strain isolated from a fecal sample of a 34-year-old adult male in Taiwan. This strain may represent a new bacterium, as suggested by a comparison based on whole-genome sequencing. The genome assembly comprised 6,089,737 bp, with a 45.63% G+C content.

scholarly journals Draft Genome Sequence of Ruminococcus sp. nov. B05, Isolated from Human Feces

2019 ◽  
Vol 8 (2) ◽  
Author(s):  
Chien-Hsun Huang ◽  
Jong-Shian Liou ◽  
Chun-Lin Wang ◽  
Lina Huang
Keyword(s):  
Genome Sequence ◽  
Adult Male ◽  
Genome Assembly ◽  
Fecal Sample ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Human Feces ◽  
Content Type ◽  
Republic Of China ◽  
Old Adult

Ruminococcus sp. nov. B05 was isolated from a fecal sample of a 34-year-old adult male in Taiwan, Republic of China. The genome assembly comprised 3,576,560 bp, with a 38.71% G+C content.

scholarly journals Draft Genome Sequence of an Extensively Drug-Resistant Salmonella enterica Serovar Typhi Strain from a Returned Traveler from Pakistan

2020 ◽  
Vol 9 (31) ◽  
Author(s):  
Samantha Hao ◽  
Tess Veuthey ◽  
Saharai Caldera ◽  
Paula Hayakawa Serpa ◽  
Barbara Haller ◽  
...  
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Salmonella Enterica ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome ◽  
Drug Resistant ◽  
Content Type ◽  
Salmonella Enterica Serovar Typhi ◽  
Extensively Drug Resistant

ABSTRACT We report a draft genome sequence of extensively drug-resistant (XDR) Salmonella enterica serotype Typhi isolated from a returned traveler from Pakistan who developed sepsis. Whole-genome sequencing revealed relatedness to a previously reported outbreak in Pakistan and identified the blaCTX-M-15 and qnrS resistance genes.

scholarly journals Draft Genome Sequence of a Mycobacterium porcinum Strain Isolated from a Pet Cat with Atypical Mycobacterial Panniculitis

2020 ◽  
Vol 9 (11) ◽  
Author(s):  
Anthony Mannion ◽  
Tina McCollester ◽  
Alexander Sheh ◽  
Zeli Shen ◽  
Hilda Holcombe ◽  
...  
Keyword(s):  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Fast Growing

A fast-growing Mycobacterium species was cultured from draining, purulent lesions on the caudal abdomen of a 12-year-old male domestic long-haired cat. Whole-genome sequencing identified the organism as Mycobacterium porcinum.

scholarly journals Draft Genome Sequence of Methanobacterium sp. Strain 34x, Reconstructed from an Enriched Electromethanogenic Biocathode

2019 ◽  
Vol 8 (45) ◽  
Author(s):  
Ala’a Ragab ◽  
Dario R. Shaw ◽  
Krishna P. Katuri ◽  
Pascal E. Saikaly
Keyword(s):  
Genome Sequence ◽  
Genome Assembly ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome ◽  
Nucleotide Level ◽  
Content Type ◽  
Functional Potential ◽  
Insight Into ◽  
Genomic Similarity

A draft genome sequence of Methanobacterium sp. strain 34x was reconstructed from the metagenome of an enriched electromethanogenic biocathode operated in a microbial electrosynthesis (MES) reactor. Methanobacterium sp. strain 34x has 68.98% nucleotide-level genomic similarity with the closest related methanogen available with a whole-genome assembly, Methanobacterium lacus strain AL-21. This genome will provide insight into the functional potential of methanogens at the biocathodes of MES systems.

scholarly journals Draft Genome Sequence of Weissella viridescens UCO-SMC3, Isolated from the Slime of Helix aspersa Müller Snails

2019 ◽  
Vol 8 (11) ◽  
Author(s):  
Apolinaria Garcia-Cancino ◽  
Leonardo Albarracin ◽  
Marcela Espinoza-Monje ◽  
Jorge Campos-Martin ◽  
Valeria Garcia-Castillo ◽  
...  
Keyword(s):  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Genome Sequence ◽  
Draft Genome ◽  
Illumina Miseq ◽  
Helix Aspersa ◽  
Draft Genome Sequence ◽  
Whole Genome ◽  
Content Type

This report describes the draft genome sequence of Weissella viridescens UCO-SMC3, isolated from Helix aspersa Müller slime. The reads were generated by a whole-genome sequencing (WGS) strategy on an Illumina MiSeq sequencer and were assembled into contigs with a total estimated size of 1,612,814 bp.

scholarly journals Draft Genome Sequence of Blautia sp. Strain BCRC 81119, Isolated from Human Feces

2018 ◽  
Vol 7 (4) ◽  
Author(s):  
Chien-Hsun Huang ◽  
Jong-Shian Liou ◽  
Chun-Lin Wang ◽  
Lina Huang
Keyword(s):  
Genome Sequence ◽  
Fecal Sample ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Human Feces ◽  
Content Type

Blautia sp. strain BCRC 81119 was isolated from a fecal sample from a 34-year-old male in Taiwan.

scholarly journals Draft Genome Sequence of Leptospira yasudae Strain BJ3, Isolated from the Soil of an Ex Situ Wild Animal Conservation Area

2021 ◽  
Vol 10 (39) ◽  
Author(s):  
Nadia Aqilla Shamsusah ◽  
Hani Kartini Agustar ◽  
Fairuz Amran ◽  
Rozita Hod
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Draft Genome ◽  
Wild Animal ◽  
Ex Situ ◽  
Draft Genome Sequence ◽  
Whole Genome ◽  
Animal Conservation ◽  
Conservation Area ◽  
Content Type

Previously, a novel Leptospira strain (BJ3) was isolated from the soil of an ex situ wild animal conservation area in Perak, Malaysia. Molecular identification via whole-genome sequencing confirmed that the strain was Leptospira yasudae . Here, we report the draft genome sequence of L. yasudae strain BJ3.

scholarly journals Draft Genome Sequence of the Type Strain Bacillus subtilis subsp. subtilis DSM10

2021 ◽  
Vol 10 (10) ◽  
Author(s):  
Lars Lilge ◽  
Robert Hertel ◽  
Kambiz Morabbi Heravi ◽  
Marius Henkel ◽  
Fabian M. Commichau ◽  
...  
Keyword(s):  
Bacillus Subtilis ◽  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Genome Sequence ◽  
Type Strain ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Subtilis Subsp

ABSTRACT The Bacillus subtilis subsp. subtilis type strain DSM10 has been used as a reference in various studies. However, detailed information about the genome has not been available. Therefore, whole-genome sequencing was performed, and the sequence was compared with that of the related B. subtilis strain NCIB3610.

scholarly journals Draft Genome Sequence of Mediterraneibacter sp. nov. Strain gm002, Isolated from Human Feces

2019 ◽  
Vol 8 (31) ◽  
Author(s):  
Chien-Hsun Huang ◽  
Jong-Shian Liou ◽  
Chun-Lin Wang ◽  
Lina Huang
Keyword(s):  
Genome Sequence ◽  
Genome Assembly ◽  
Dna Hybridization ◽  
Novel Species ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Nucleotide Identity ◽  
Whole Genome ◽  
Average Nucleotide Identity ◽  
Human Feces

Here, we report a draft genome sequence of Mediterraneibacter sp. strain gm002, isolated from human feces in Taiwan. This strain represents a novel species according to whole-genome-based comparisons using the average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) thresholds. The genome assembly comprised 3,568,768 bp, with a 38.7% G+C content.

scholarly journals Draft Genome Sequence of Bacillus lehensis M136, Isolated from the Manleluag Hyperalkaline Spring in Pangasinan, Philippines

2019 ◽  
Vol 8 (13) ◽  
Author(s):  
Aprill P. Manalang ◽  
Andrew D. Montecillo ◽  
Lorren Myriccar G. Berdos ◽  
Rose Ann G. Franco ◽  
Eula Francia M. Bosito ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Genome Assembly ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type

Here, we report the draft whole-genome sequence of Bacillus lehensis M136, isolated from a hyperalkaline spring located in Pangasinan, Philippines. From 24 scaffolds, the total genome assembly length is 3,985,437 bp.

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