Draft Genome Sequence of Rathayibacter sp. Strain VKM Ac-2630 Isolated from Leaf Gall Induced by the Knapweed Nematode Mesoanguina picridis on Acroptilon repens

ABSTRACT A draft genome sequence of Rathayibacter sp. strain VKM Ac-2630 was derived using Ion Torrent sequencing technology. The genome size of this strain is 3.88 Mb, with an average G+C content of 72.0%. Genomic evidence of an aerobic mode of respiration and a heterotrophic lifestyle of this bacterium was obtained.

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Draft Genome Sequence of Modestobacter sp. strain VKM Ac-2676 from soil in the area of sharply continental climate

10.1101/179697 ◽

2017 ◽

Author(s):

Oleg V. Vasilenko ◽

Sergey V. Tarlachkov ◽

Irina P. Starodumova ◽

Elena V. Ariskina ◽

Kseniya I. Ariskina ◽

...

Keyword(s):

Genome Size ◽

Genome Sequence ◽

Draft Genome ◽

Draft Genome Sequence ◽

Ion Torrent ◽

Sequencing Technology ◽

Climate Zone ◽

Genes Encoding ◽

Ion Torrent Sequencing ◽

Continental Climate

A draft genome sequence of a novel actinobacterium, Modestobacter sp. strain VKM Ac-2676, was derived using Ion Torrent sequencing technology. The genome size is 3.88 Mb with average G+C content of 73.40%. The genes encoding properties relevant to adaptability of this bacterium to a sharply continental climate zone were revealed.

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Draft Genome Sequence of Lactobacillus plantarum 2025

Genome Announcements ◽

10.1128/genomea.01532-15 ◽

2016 ◽

Vol 4 (1) ◽

Cited By ~ 1

Author(s):

Andrey V. Karlyshev ◽

Valentin C. Khlebnikov ◽

Igor V. Kosarev ◽

Vyacheslav M. Abramov

Keyword(s):

Lactobacillus Plantarum ◽

Genome Sequence ◽

Draft Genome ◽

Draft Genome Sequence ◽

Ion Torrent ◽

Sequencing Technology ◽

Total Size ◽

Ion Torrent Sequencing

A draft genome sequence of Lactobacillus plantarum 2025 was derived using Ion Torrent sequencing technology. The total size of the assembly (3.33 Mb) was in agreement with the genome sizes of other strains of this species. The data will assist in revealing the genes responsible for the specific properties of this strain.

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Genome Sequence of Clostridium botulinum Strain Adk2012 Associated with a Foodborne Botulinum Case in Tottori, Japan, in 2012

Genome Announcements ◽

10.1128/genomea.00872-17 ◽

2017 ◽

Vol 5 (34) ◽

Author(s):

Hiroshi Asakura ◽

Shiori Yamamoto ◽

Yoshika Momose ◽

Haru Kato ◽

Masaaki Iwaki ◽

...

Keyword(s):

Genome Size ◽

Genome Sequence ◽

Clostridium Botulinum ◽

Draft Genome ◽

Draft Genome Sequence ◽

Content Type ◽

Foodborne Botulism

ABSTRACT We report here a draft genome sequence of Clostridium botulinum Adk2012 responsible for a foodborne botulism case that occurred in Tottori, Japan, in 2012. Its genome size was 2,904,173 bp, with 46 rRNAs and 54 tRNAs, at a coverage of 14.5×.

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Draft Genome Sequence of a Red Basidiomycete Yeast, Symmetrospora coprosmae Strain UCD350, Isolated from Soil in Ireland

Microbiology Resource Announcements ◽

10.1128/mra.01256-19 ◽

2019 ◽

Vol 8 (44) ◽

Author(s):

Jameela Almasoud ◽

Laoise McArdle ◽

Ryan Henne ◽

Karen Mathews ◽

Ísla O’Connor ◽

...

Keyword(s):

Genome Size ◽

Genome Sequence ◽

Draft Genome ◽

Draft Genome Sequence ◽

Content Type ◽

Red Yeast

Symmetrospora coprosmae is a red yeast from the subphylum Pucciniomycotina in the phylum Basidiomycota. Here, we present the first genome sequence of S. coprosmae strain UCD350, from an isolate collected from soil in Ireland. The genome size is 20.2 Mb.

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Draft Genome Sequence of Lactobacillus sakei Strain FBL1, a Probiotic Bacterium Isolated from Mukeunji , a Long-Fermented Kimchi, in South Korea

Genome Announcements ◽

10.1128/genomea.00365-16 ◽

2016 ◽

Vol 4 (3) ◽

Cited By ~ 4

Author(s):

Jae-Hwan Kim ◽

Eiseul Kim ◽

Chang-Gyeom Kim ◽

Dong-Won Choo ◽

Hae-Yeong Kim

Keyword(s):

South Korea ◽

Genome Size ◽

Genome Sequence ◽

Draft Genome ◽

Probiotic Bacterium ◽

Draft Genome Sequence ◽

Lactobacillus Sakei

This report describes the 2,032,158-bp draft genome sequence of Lactobacillus sakei ( L. sakei ) strain FBL1, isolated from mukeunji purchased at the Gwangju World Kimchi Culture Festival in 2012, South Korea. The total draft genome size was 2,032,158 bp with a G+C content of 41.2%.

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Draft Genome Sequence of Filamentous Fungus Phialemoniopsis curvata, Isolated from Diesel Fuel

Microbiology Resource Announcements ◽

10.1128/mra.00400-19 ◽

2019 ◽

Vol 8 (30) ◽

Author(s):

Vanessa A. Varaljay ◽

Wanda J. Lyon ◽

Audra L. Crouch ◽

Carrie A. Drake ◽

Jeffrey M. Hollomon ◽

...

Keyword(s):

Fatty Acid ◽

Genome Size ◽

Genome Sequence ◽

Diesel Fuel ◽

Filamentous Fungus ◽

Draft Genome ◽

Draft Genome Sequence ◽

Beta Oxidation ◽

Content Type

Phialemoniopsis curvata D216 is a filamentous fungus isolated from contaminated diesel fuel. The genome size is 40.3 Mbp with a G+C content of 54.81%. Its genome encodes enzymes and pathways likely involved in the degradation of and survival in fuel, including lipases, fatty acid transporters, and beta oxidation.

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Improved De Novo Draft Genome Sequence of the Nocavionin-Producing Type Strain Nocardia terpenica IFM 0706 and Comparative Genomics with the Closely Related Strain Nocardia terpenica IFM 0406

Microbiology Resource Announcements ◽

10.1128/mra.00689-20 ◽

2020 ◽

Vol 9 (34) ◽

Author(s):

Anina Buchmann ◽

Harald Gross

Keyword(s):

Comparative Genomics ◽

Genome Size ◽

Genome Sequence ◽

Type Strain ◽

De Novo ◽

Draft Genome ◽

Pathogenic Strain ◽

Draft Genome Sequence ◽

Related Strain ◽

Content Type

ABSTRACT We report an improved de novo draft genome sequence of the human-pathogenic strain Nocardia terpenica IFM 0706T. The resequencing unveiled that the genome size is larger than anticipated, reducing significantly the number of contigs and building a basis for comparison with the closely related strain N. terpenica IFM 0406.

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Draft Genome Sequence of Desulfovibrio BerOc1, a Mercury-Methylating Strain

Genome Announcements ◽

10.1128/genomea.01483-16 ◽

2017 ◽

Vol 5 (3) ◽

Cited By ~ 1

Author(s):

Marisol Goñi Urriza ◽

Claire Gassie ◽

Oliver Bouchez ◽

Christophe Klopp ◽

Rémy Guyoneaud

Keyword(s):

Genome Size ◽

Genome Sequence ◽

Draft Genome ◽

Mediterranean Coast ◽

Draft Genome Sequence ◽

Mercury Methylation ◽

Sulfate Reducing

ABSTRACT Desulfovibrio BerOc1 is a sulfate-reducing bacterium isolated from the Berre lagoon (French Mediterranean coast). BerOc1 is able to methylate and demethylate mercury. The genome size is 4,081,579 bp assembled into five contigs. We identified the hgcA and hgcB genes involved in mercury methylation, but not those responsible for mercury demethylation.

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Draft Genome Sequence of Rummeliibacillus sp. Strain TYF005, a Physiologically Recalcitrant Bacterium with High Ethanol and Salt Tolerance Isolated from Spoilage Vinegar

Microbiology Resource Announcements ◽

10.1128/mra.00244-19 ◽

2019 ◽

Vol 8 (31) ◽

Author(s):

Min Li ◽

Yao Li ◽

Xiaojun Fan ◽

Yuhong Qin ◽

Yongji He ◽

...

Keyword(s):

Salt Tolerance ◽

Genome Size ◽

Genome Sequence ◽

Draft Genome ◽

Gc Content ◽

Thermophilic Bacterium ◽

Draft Genome Sequence ◽

Content Type ◽

High Ethanol

Rummeliibacillus sp. strain TYF005 is a thermophilic bacterium with high ethanol (8% vol/vol) and salt (13% wt/vol) tolerance that was isolated from spoilage vinegar. Here, we report the draft genome sequence of this strain, which has 117 scaffolds with a total genome size of 3.7 Mb and a 34.4% GC content.

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