scholarly journals Draft Genome Sequence of Marinobacter sp. Strain ANT_B65, Isolated from Antarctic Marine Sponge

2018 ◽  
Vol 6 (1) ◽  
Author(s):  
Paula de França ◽  
Esther Camilo ◽  
Fabiana Fantinatti-Garboginni
Keyword(s):  
Natural Products ◽  
Genome Sequence ◽  
Marine Sponge ◽  
Draft Genome ◽  
Open Reading Frames ◽  
King George Island ◽  
Protein Coding ◽  
Antarctic Marine ◽  
Potential Use ◽  
Reading Frames

ABSTRACT Marinobacter sp. strain ANT_B65 was isolated from sponge collected in King George Island, Antarctica. The draft genome of 4,173,840 bp encodes 3,743 protein-coding open reading frames. The genome will provide insights into the strain’s potential use in the production of natural products.

scholarly journals Draft Genome Sequence of the Fungus Trametes hirsuta 072

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Andrey R. Pavlov ◽  
Tatiana V. Tyazhelova ◽  
Konstantin V. Moiseenko ◽  
Daria V. Vasina ◽  
Olga V. Mosunova ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Genome Annotation ◽  
Draft Genome ◽  
Open Reading Frames ◽  
White Rot ◽  
Draft Genome Sequence ◽  
Trametes Hirsuta ◽  
Protein Coding ◽  
Putative Protein ◽  
Reading Frames

A standard draft genome sequence of the white rot saprotrophic fungus Trametes hirsuta 072 ( Basidiomycota , Polyporales ) is presented. The genome sequence contains about 33.6 Mb assembled in 141 scaffolds with a G+C content of ~57.6%. The draft genome annotation predicts 14,598 putative protein-coding open reading frames (ORFs).

scholarly journals Draft Genome Sequence of a Novel Marinobacter sp. Strain from Honolulu Harbor, Hawai‘i

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Xuehua Wan ◽  
Shaobin Hou ◽  
Siobhan L. Burns ◽  
Jennifer A. Saito ◽  
Stuart P. Donachie
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Open Reading Frames ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Reading Frames

Marinobacter sp. strain X15-166B T was cultivated from sediment in Honolulu Harbor, Hawai‘i. The X15-166B T draft genome of 3,490,661 bp encodes 3,115 protein-coding open reading frames. We anticipate that the genome will provide insights into the strain’s lifestyle and the evolution of Marinobacter .

scholarly journals Draft Genome Sequence of a Novel Luteimonas sp. Strain from Coral Mucus, Hawai‘i

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Xuehua Wan ◽  
James M. Miller ◽  
Sonia J. Rowley ◽  
Shaobin Hou ◽  
Stuart P. Donachie
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Open Reading Frames ◽  
Draft Genome Sequence ◽  
Diguanylate Cyclase ◽  
Protein Coding ◽  
Coral Mucus ◽  
Coding Regions ◽  
Porites Lobata ◽  
Reading Frames

Luteimonas sp. strain JM171 was cultivated from mucus collected around the coral Porites lobata . The JM171 draft genome of 2,992,353 bp contains 2,672 protein-coding open reading frames, 45 tRNA coding regions, and encodes a putative globin-coupled diguanylate cyclase, Jm GReg.

scholarly journals Draft Genome Sequence of Streptomyces sp. XY006, an Endophyte Isolated from Tea (Camellia sinensis)

2017 ◽  
Vol 5 (37) ◽  
Author(s):  
Wenna Shan ◽  
Huihui Liu ◽  
Ying Zhou ◽  
Xiaomin Yu
Keyword(s):  
Natural Products ◽  
Genome Sequence ◽  
Camellia Sinensis ◽  
Draft Genome ◽  
High Capacity ◽  
Endophytic Bacterium ◽  
Tea Plant ◽  
Open Reading Frames ◽  
Streptomyces Sp ◽  
Reading Frames

ABSTRACT Streptomyces sp. XY006 is an endophytic bacterium isolated from the young leaf material of the tea plant (Camellia sinensis). The draft genome consists of 8.2 Mb and encodes 7,415 putative open reading frames. This strain is found to contain a high capacity for the production of natural products.

scholarly journals Draft Genome Sequence of Saccharomonospora sp. Strain LRS4.154, a Moderately Halophilic Actinobacterium with the Biotechnologically Relevant Polyketide Synthase and Nonribosomal Peptide Synthetase Systems

2017 ◽  
Vol 5 (21) ◽  
Author(s):  
Scarlett Alonso-Carmona ◽  
Blanca Vera-Gargallo ◽  
Rafael R. de la Haba ◽  
Antonio Ventosa ◽  
Horacio Sandoval-Trujillo ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Polyketide Synthase ◽  
Draft Genome ◽  
Nonribosomal Peptide Synthetase ◽  
Open Reading Frames ◽  
Draft Genome Sequence ◽  
Nonribosomal Peptide ◽  
Moderately Halophilic ◽  
Peptide Synthetase ◽  
Reading Frames

ABSTRACT The draft genome sequence of Saccharomonospora sp. strain LRS4.154, a moderately halophilic actinobacterium, has been determined. The genome has 4,860,108 bp, a G+C content of 71.0%, and 4,525 open reading frames (ORFs). The clusters of PKS and NRPS genes, responsible for the biosynthesis of a large number of biomolecules, were identified in the genome.

scholarly journals Genome Sequence of Pseudomonas sp. Strain LAP_36, A Rhizosphere Bacterium Isolated from King George Island, Antarctica

2021 ◽  
Vol 10 (48) ◽  
Author(s):  
Sarah Mederos da Silveira ◽  
Sheila da Silva ◽  
Andrew Macrae ◽  
Rommel T. J. Ramos ◽  
Fabrício A. Araújo ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
South Shetland Islands ◽  
Deschampsia Antarctica ◽  
King George Island ◽  
Protein Coding ◽  
Content Type ◽  
Shetland Islands ◽  
Rhizosphere Bacterium

Pseudomonas sp. strain LAP_36 was isolated from rhizosphere soil from Deschampsia antarctica on King George Island, South Shetland Islands, Antarctica. Here, we report on its draft genome sequence, which consists of 8,794,771 bp with 60.0% GC content and 8,011 protein-coding genes.

scholarly journals Draft Genome Sequence of Bacillus sp. Strain SPB7, Isolated from the Marine Sponge Spongia officinalis

2020 ◽  
Vol 9 (30) ◽  
Author(s):  
Dhruba Bhattacharya ◽  
Sergio de los Santos Villalobos ◽  
Valeria Valenzuela Ruiz ◽  
Joseph Selvin ◽  
Joydeep Mukherjee
Keyword(s):  
Genome Sequence ◽  
Marine Sponge ◽  
Draft Genome ◽  
Single Copy ◽  
5S Rrna ◽  
Bacillus Sp ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Spongia Officinalis

ABSTRACT The draft genome of Bacillus sp. SPB7, which was isolated from the marine sponge Spongia officinalis, is presented. This bacterium is a producer of an antimicrobial cyclic diketopiperazine, (3S,6S)-3,6-diisobutylpiperazine-2,5-dione. The genome consists of 4,511 protein-coding genes, 63 tRNAs, 2 16S rRNAs, 3 23S rRNAs, and a single copy of 5S rRNA.

scholarly journals Draft Genome Sequence of the Endophyte Bacillus mycoides Strain GM6LP Isolated from Lolium perenne

2018 ◽  
Vol 6 (5) ◽  
Author(s):  
Franziska Wemheuer ◽  
Jacqueline Hollensteiner ◽  
Anja Poehlein ◽  
Heiko Liesegang ◽  
Rolf Daniel ◽  
...  
Keyword(s):  
Lolium Perenne ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Plant Tissues ◽  
Bacillus Mycoides ◽  
Protein Coding ◽  
Plant Growth Promoting ◽  
Growth Promoting ◽  
Potential Use

ABSTRACT Bacillus mycoides GM6LP is an endophyte isolated from plant tissues of Lolium perenne L. Here, we report its draft genome sequence (6.2 Mb), which contains 96 contigs and 6,129 protein-coding genes. Knowledge about its genome will enable us to evaluate the potential use of GM6LP as a plant growth-promoting bacterium.

scholarly journals Draft Genome Sequence of a Chitinophaga Strain Isolated from a Lignocellulose Biomass-Degrading Consortium

2017 ◽  
Vol 5 (3) ◽  
Author(s):  
Luciano T. Kishi ◽  
Erica M. Lopes ◽  
Camila C. Fernandes ◽  
Gabriela C. Fernandes ◽  
Lais P. Sacco ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Genome Assembly ◽  
Plant Biomass ◽  
Draft Genome ◽  
Bacterial Consortium ◽  
Open Reading Frames ◽  
Draft Genome Sequence ◽  
Draft Genome Assembly ◽  
Reading Frames ◽  
Lignocellulose Biomass

ABSTRACT Chitinophaga comprises microorganisms capable of degrading plant-derived carbohydrates, serving as a source of new tools for the characterization and degradation of plant biomass. Here, we report the draft genome assembly of a Chitinophaga strain with 8.2 Mbp and 7,173 open reading frames (ORFs), isolated from a bacterial consortium that is able to degrade lignocellulose.

scholarly journals Draft Genome Sequence of Bradyrhizobium elkanii TnphoA 33, a Producer of Polyhydroxyalkanoates

2017 ◽  
Vol 5 (8) ◽  
Author(s):  
Erica M. Lopes ◽  
Luciano T. Kishi ◽  
Camila C. Fernandes ◽  
Fernanda Larozza Paganelli ◽  
Lucia M. C. Alves ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Genome Assembly ◽  
Draft Genome ◽  
Open Reading Frames ◽  
Draft Genome Sequence ◽  
Nitrogen Fixing ◽  
Content Type ◽  
Draft Genome Assembly ◽  
Bradyrhizobium Elkanii ◽  
Reading Frames

ABSTRACT The genus Bradyrhizobium comprises bacteria with the ability to form nitrogen-fixing symbioses with legumes. They are of great interest in agriculture, as well as for the production of biopolymers such as polyhydroxyalkanoates. Here, we report the draft genome assembly of Bradyrhizobium elkanii TnphoA 33 comprising 9 Mb, 1,124 contigs, and 9,418 open reading frames.

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