scholarly journals Complete Genome Sequence of Novel Pseudorabies Virus Strain HNB Isolated in China

2016 ◽  
Vol 4 (1) ◽  
Author(s):  
Teng Yu ◽  
Fangzhou Chen ◽  
Xugang Ku ◽  
Yinxing Zhu ◽  
Hailong Ma ◽  
...  
Keyword(s):  
Next Generation Sequencing ◽  
Vaccine Strain ◽  
Genome Sequence ◽  
Virus Strain ◽  
Complete Genome Sequence ◽  
Viral Genome ◽  
Complete Genome ◽  
Pseudorabies Virus ◽  
Weaned Pig ◽  
Generation Sequencing

The complete genome sequence of a novel pseudorabies virus, strain HNB, isolated from a dead weaned pig in China, was determined using next-generation sequencing. The viral genome sequence of HNB shared 90.6% nucleotide similarity with that of the traditional vaccine strain, the Bartha strain.

scholarly journals Complete Genome Sequence of Matlo Bat Lyssavirus

2021 ◽  
Vol 10 (20) ◽  
Author(s):  
Colyn S. Grobler ◽  
Jessica Coertse ◽  
Wanda Markotter
Keyword(s):  
South Africa ◽  
Next Generation Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Novel Species ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Sequencing Technologies ◽  
Generation Sequencing

ABSTRACT The genus Lyssavirus includes rabies virus as well as multiple diverse and recently described novel species. Using next-generation sequencing technologies, we have obtained the whole-genome sequence of Matlo bat lyssavirus, which was isolated from a Natal long-fingered bat (Miniopterus natalensis) in South Africa.

scholarly journals Complete Genome Sequence of a Novel Human Gammapapillomavirus Isolated from Skin

2017 ◽  
Vol 5 (34) ◽  
Author(s):  
Rosario N. Brancaccio ◽  
Alexis Robitaille ◽  
Sankhadeep Dutta ◽  
Dana E. Rollison ◽  
Nicole Fischer ◽  
...  
Keyword(s):  
Human Papillomavirus ◽  
Next Generation Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Open Reading Frame ◽  
Next Generation ◽  
Degenerate Pcr ◽  
Reading Frame ◽  
Generation Sequencing

ABSTRACT A novel human papillomavirus (HPV ICB1) was fully characterized from a skin swab by using a sensitive degenerate PCR protocol combined with next-generation sequencing. The L1 open reading frame of HPV ICB1 shares 70.54% nucleotide homology with its closest relative, HPV164, and thus constitutes a novel human gammapapillomavirus.

scholarly journals Complete Genome Sequence of Bovine Adenovirus Type 7 Strain Fukuroi, Isolated from a Cow with Respiratory Disease

2021 ◽  
Vol 10 (10) ◽  
Author(s):  
Asuka Kumagai ◽  
Sayo Kajikawa ◽  
Ayako Miyazaki ◽  
Shinichi Hatama
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Viral Genome ◽  
Complete Genome ◽  
Adenovirus Type ◽  
Prototype Strain ◽  
Sequencing Technology ◽  
Bovine Adenovirus ◽  
Next Generation Sequencing Technology ◽  
Generation Sequencing

ABSTRACT We determined the complete genome sequence of the bovine adenovirus type 7 prototype strain Fukuroi using next-generation sequencing technology. We found that the viral genome is 30,034 bp long and has the shortest inverted terminal repeats among known adenoviruses.

scholarly journals Complete Genome Sequence of an Emergent Recombinant GII.P16-GII.2 Norovirus Strain Associated with an Epidemic Spread in the Winter of 2016-2017 in Hong Kong, China

2017 ◽  
Vol 5 (20) ◽  
Author(s):  
Martin C. W. Chan ◽  
Kirsty Kwok ◽  
Tin-Nok Hung ◽  
Lok-Yi Chan ◽  
Paul K. S. Chan
Keyword(s):  
Hong Kong ◽  
Next Generation Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Nucleotide Identity ◽  
Epidemic Spread ◽  
Next Generation ◽  
Generation Sequencing

ABSTRACT A new recombinant norovirus, GII.P16-GII.2, emerged in the winter of 2016-2017. Here, we report the complete genome of this strain (Hu/GII/HK/2016/GII.P16-GII.2/CUHK-NS-1082), which was collected from a patient hospitalized with gastroenteritis in September 2016 in Hong Kong, China, and sequenced using next-generation sequencing. This genome had a 95.2% nucleotide identity to the closest sequence in GenBank.

scholarly journals Complete Genome Sequence of Peste des Petits Ruminants Virus from Georgia, 2016

2017 ◽  
Vol 5 (41) ◽  
Author(s):  
Paulina Z. Rajko-Nenow ◽  
Tabitha G. Cunliffe ◽  
John T. Flannery ◽  
Honorata M. Ropiak ◽  
Lasha Avaliani ◽  
...  
Keyword(s):  
Next Generation Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Sanger Sequencing ◽  
Peste Des Petits Ruminants ◽  
Sequencing Technology ◽  
Next Generation Sequencing Technology ◽  
Lineage Iv ◽  
Generation Sequencing

ABSTRACT We report here the complete genome sequence of a peste des petits ruminants virus (PPRV) from the first outbreak of the disease in Georgia in January 2016. Genome sequencing was performed using Illumina next-generation sequencing technology in conjunction with Sanger sequencing. This PPRV/Georgia/Tbilisi/2016 genome sequence clustered within lineage IV PPRV viruses.

scholarly journals Complete Genome Sequence of Ornithogalum Mosaic Virus Infecting Gladiolus spp. in South Korea

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Sang-Yun Cho ◽  
Seungmo Lim ◽  
Hongsup Kim ◽  
Seung-In Yi ◽  
Jae Sun Moon
Keyword(s):  
Next Generation Sequencing ◽  
South Korea ◽  
Mosaic Virus ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Sanger Sequencing ◽  
Sequence Information ◽  
Next Generation ◽  
Generation Sequencing

We report here the first complete genome sequence of Ornithogalum mosaic virus (OrMV) isolated from Taean, South Korea, in 2011, which was obtained by next-generation sequencing and Sanger sequencing. The sequence information provided here may serve as a potential reference for other OrMV isolates.

scholarly journals Complete Genome Sequence of a Bell Pepper Endornavirus Isolate from Canada

2015 ◽  
Vol 3 (4) ◽  
Author(s):  
Bin Chen ◽  
Mark Bernards ◽  
Aiming Wang
Keyword(s):  
Next Generation Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Small Rnas ◽  
Complete Genome ◽  
Rna Virus ◽  
Bell Pepper ◽  
Pepper Plant ◽  
Double Stranded Rna ◽  
Generation Sequencing

Bell pepper endornavirus (BPEV) is a double-stranded RNA virus infecting economically important crops, such as peppers. Next-generation sequencing of small RNAs extracted from the leaves of a pepper plant showing mild viral symptoms, along with subsequent analysis, identified BPEV. The complete genome of this isolate was cloned and sequenced.

Sign in / Sign up

Export Citation Format

Share Document