scholarly journals Near-Complete Genome Sequence of a SARS-CoV-2 VOC 202012/01 Strain in Peru

2021 ◽  
Vol 10 (12) ◽  
Author(s):  
C. Padilla-Rojas ◽  
L. Barcena-Flores ◽  
K. Vega-Chozo ◽  
M. Galarza-Perez ◽  
H. Bailon-Calderon ◽  
...  
Keyword(s):  
Severe Acute Respiratory Syndrome ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Swab Sample ◽  
Oropharyngeal Swab

ABSTRACT A near-complete genome sequence was obtained for a novel severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variant of concern (VOC) 202012/01 strain obtained from an oropharyngeal swab sample from a Peruvian patient with coronavirus syndrome who had contact with an individual who had recently returned from England.

scholarly journals Complete Genome Sequence of a SARS-CoV-2 Strain Isolated in Northern Germany

2020 ◽  
Vol 9 (23) ◽  
Author(s):  
Susanne Pfefferle ◽  
Jiabin Huang ◽  
Dominik Nörz ◽  
Daniela Indenbirken ◽  
Marc Lütgehetmann ◽  
...  
Keyword(s):  
Severe Acute Respiratory Syndrome ◽  
Female Patient ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Swab Sample ◽  
Northern Germany ◽  
Oropharyngeal Swab

ABSTRACT Here, we describe the complete genome sequence of a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) strain isolated from an oropharyngeal swab sample from a female patient with COVID-19 who was infected in Hamburg, northern Germany.

scholarly journals Genome Sequence of a SARS-CoV-2 P.1 Variant of Concern (20J/501Y.V3) from Bangladesh

2021 ◽  
Vol 10 (27) ◽  
Author(s):  
M. Murshed Hasan Sarkar ◽  
Mohammad Fazle Alam Rabbi ◽  
Shahina Akter ◽  
Tanjina Akhtar Banu ◽  
Barna Goswami ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Severe Acute Respiratory Syndrome ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Travel History ◽  
Oropharyngeal Swab ◽  
Swab Specimen

This study reports the coding-complete genome sequence, with variant identifications and phylogenetic analysis, of a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) P.1 variant (20J/501Y.V3), obtained from an oropharyngeal swab specimen from a female Bangladeshi patient diagnosed with coronavirus disease 2019 (COVID-19) with no travel history.

scholarly journals Complete Genome Sequence of a 2019 Novel Coronavirus (SARS-CoV-2) Strain Isolated in Nepal

2020 ◽  
Vol 9 (11) ◽  
Author(s):  
Ranjit Sah ◽  
Alfonso J. Rodriguez-Morales ◽  
Runa Jha ◽  
Daniel K. W. Chu ◽  
Haogao Gu ◽  
...  
Keyword(s):  
Severe Acute Respiratory Syndrome ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Oropharyngeal Swab ◽  
Novel Coronavirus ◽  
Swab Specimen

A complete genome sequence was obtained for a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) strain isolated from an oropharyngeal swab specimen of a Nepalese patient with coronavirus disease 2019 (COVID-19), who had returned to Nepal after traveling to Wuhan, China.

scholarly journals Coding-Complete Genome Sequence of a SARS-CoV-2 Strain Isolated in Gilgit, Pakistan

2021 ◽  
Vol 10 (13) ◽  
Author(s):  
Aneela Javed ◽  
Saifullah Khan Niazi ◽  
Eijaz Ghani ◽  
Maham Yamin ◽  
Muhammad Saqib ◽  
...  
Keyword(s):  
Severe Acute Respiratory Syndrome ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Nasopharyngeal Swab

ABSTRACT Here, we report the coding-complete genome sequence of a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) isolate obtained from a nasopharyngeal swab from the first patient with COVID-19 in Gilgit, Pakistan.

scholarly journals Genome Sequencing of a Novel Coronavirus SARS-CoV-2 Isolate from Iraq

2021 ◽  
Vol 10 (4) ◽  
Author(s):  
Nihad A. M. Al-Rashedi ◽  
Danilo Licastro ◽  
Sreejith Rajasekharan ◽  
Simeone Dal Monego ◽  
Alessandro Marcello ◽  
...  
Keyword(s):  
Severe Acute Respiratory Syndrome ◽  
Genome Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Illumina Miseq ◽  
Spike Protein ◽  
Protein Coding ◽  
Novel Coronavirus ◽  
First Time

ABSTRACT The coding-complete genome sequence of a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) strain isolated from an Iraqi patient was sequenced for the first-time using Illumina MiSeq technology. There was a D614G mutation in the spike protein-coding sequence. This report is valuable for better understanding the spread of the virus in Iraq.

scholarly journals Complete Genome Sequence of a 2019 Novel Coronavirus (SARS-CoV-2) Strain Causing a COVID-19 Case in Morocco

2020 ◽  
Vol 9 (27) ◽  
Author(s):  
Sanaâ Lemriss ◽  
Amal Souiri ◽  
Narjis Amar ◽  
Nabil Lemzaoui ◽  
Omar Mestoui ◽  
...  
Keyword(s):  
Severe Acute Respiratory Syndrome ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Nasopharyngeal Swab ◽  
Novel Coronavirus ◽  
Swab Specimen ◽  
Moroccan Patient

ABSTRACT Here, we report a complete genome sequence obtained for a novel severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) strain isolated from a nasopharyngeal swab specimen of a Moroccan patient with coronavirus disease 2019 (COVID-19).

scholarly journals Identification of a SARS-CoV-2 Lineage B1.1.7 Virus in New York following Return Travel from the United Kingdom

2021 ◽  
Vol 10 (9) ◽  
Author(s):  
Leonardo C. Caserta ◽  
Patrick K. Mitchell ◽  
Elizabeth Plocharczyk ◽  
Diego G. Diel
Keyword(s):  
New York ◽  
United Kingdom ◽  
Severe Acute Respiratory Syndrome ◽  
Health Systems ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Travel History ◽  
Cornell University ◽  
The United Kingdom

ABSTRACT Here, we report the identification and coding-complete genome sequence of a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) strain (NYI.B1-7.01-21) obtained from a patient with symptoms of COVID-19 who had a recent travel history to the United Kingdom. The sample was tested by the Cayuga Health Systems laboratory as part of New York State’s travel testing guidance and was sequenced at Cornell University after testing positive.

scholarly journals Genome Sequencing of the SARS-CoV-2 Delta (B.1.617.2) Variant of Concern Detected in Bangladesh

2021 ◽  
Vol 10 (48) ◽  
Author(s):  
Tanjina Akhtar Banu ◽  
M. Murshed Hasan Sarkar ◽  
Shahina Akter ◽  
Barna Goswami ◽  
Iffat Jahan ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Severe Acute Respiratory Syndrome ◽  
Genome Sequencing ◽  
Genome Sequence ◽  
Immune Evasion ◽  
Complete Genome Sequence ◽  
Complete Genome

We report the near-complete genome sequence and phylogenetic analysis of a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Delta variant (B.1.617.2) strain. This variant is associated with increased transmission and immune evasion.

scholarly journals Clinical features, isolation, and complete genome sequence of severe acute respiratory syndrome coronavirus 2 from the first two patients in Vietnam

2020 ◽  
Vol 92 (10) ◽  
pp. 2209-2215 ◽  
Author(s):  
Lan T. Phan ◽  
Thuong V. Nguyen ◽  
Loan K. T. Huynh ◽  
Manh H. Dao ◽  
Tho A. N. Vo ◽  
...  
Keyword(s):  
Severe Acute Respiratory Syndrome ◽  
Clinical Features ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome

scholarly journals Complete Genome Sequence of SARS-CoV-2 in a Tiger from a U.S. Zoological Collection

2020 ◽  
Vol 9 (22) ◽  
Author(s):  
Leyi Wang ◽  
Patrick K. Mitchell ◽  
Paul P. Calle ◽  
Susan L. Bartlett ◽  
Denise McAloose ◽  
...  
Keyword(s):  
Severe Acute Respiratory Syndrome ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Identification And Characterization

ABSTRACT This report describes the identification and characterization of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in a Malayan tiger in a U.S. zoo.

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