scholarly journals Draft Genome Sequence of Brevundimonas sp. Strain T2.26MG-97, Isolated from a Rock Core Sample from 492.6 Meters Deep on the Subsurface of the Iberian Pyrite Belt

2019 ◽  
Vol 8 (32) ◽  
Author(s):  
E. Rodríguez-Robles ◽  
J. M. Martínez ◽  
T. Leandro ◽  
R. Amils
Keyword(s):  
Genome Sequence ◽  
Dna Sequences ◽  
Draft Genome ◽  
Iberian Pyrite Belt ◽  
Core Sample ◽  
Draft Genome Sequence ◽  
Genome Length

The draft genome of Brevundimonas sp. strain T2.26MG-97, isolated at a depth of 492.6 m in the subsurface of the Iberian Pyrite Belt, is reported here. It consists of 262 scaffolds with a total genome length of 3.68 Mbp, where 3,549 coding DNA sequences have been annotated.

scholarly journals Draft Genome Sequence of Pseudomonas sp. Strain T2.31D-1, Isolated from a Drilling Core Sample Obtained 414 Meters below Surface in the Iberian Pyrite Belt

2021 ◽  
Vol 10 (1) ◽  
Author(s):  
J. M. Martínez ◽  
C. Escudero ◽  
T. Leandro ◽  
G. Mateos ◽  
R. Amils
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Iberian Pyrite Belt ◽  
Core Sample ◽  
Rrna Operon ◽  
Draft Genome Sequence ◽  
Trna Genes ◽  
Pseudomonas Sp ◽  
Coding Sequences ◽  
Drilling Core

ABSTRACT We report the draft genome of Pseudomonas sp. strain T2.31D-1, which was isolated from a drilling core sample obtained 414 m below surface in the Iberian Pyrite Belt. The genome consists of a 4.7-Mb chromosome with 4,428 coding sequences, 1 rRNA operon, 59 tRNA genes, and a 31.8-kb plasmid.

scholarly journals Draft Genome Sequence of the Deep-Subsurface Actinobacterium Tessaracoccus lapidicaptus IPBSL-7 T

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Fernando Puente-Sánchez ◽  
Dietmar H. Pieper ◽  
Alejandro Arce-Rodríguez
Keyword(s):  
Genome Size ◽  
Genome Sequence ◽  
Dna Sequences ◽  
Type Strain ◽  
Draft Genome ◽  
Iberian Pyrite Belt ◽  
Draft Genome Sequence ◽  
Rrna Genes ◽  
Trna Genes ◽  
Deep Subsurface

The type strain of Tessaracoccus lapidicaptus was isolated from the deep subsurface of the Iberian Pyrite Belt (southwest Spain). Here, we report its draft genome, consisting of 27 contigs with a ~3.1-Mb genome size. The annotation revealed 2,905 coding DNA sequences, 45 tRNA genes, and three rRNA genes.

scholarly journals Draft Genome Sequence of Shewanella sp. Strain T2.3D-1.1, Isolated from 121.8 Meters Deep in the Subsurface of the Iberian Pyrite Belt

2020 ◽  
Vol 9 (40) ◽  
Author(s):  
Sofia de Francisco-Polanco ◽  
José M. Martínez ◽  
Tania Leandro ◽  
Ricardo Amils
Keyword(s):  
Genome Sequence ◽  
Dna Sequences ◽  
Draft Genome ◽  
Iberian Pyrite Belt ◽  
Rrna Operon ◽  
Draft Genome Sequence ◽  
Trna Genes ◽  
Deep Subsurface

ABSTRACT Shewanella sp. strain T2.3D-1.1 was isolated from the deep subsurface of the Iberian Pyrite Belt. We report its draft genome sequence, consisting of 49 scaffolds, with a chromosome of ≈4.6 Mb and a 23.8-kb plasmid. The chromosome annotation identified 4,068 coding DNA sequences, 1 rRNA operon, and 108 tRNA genes.

scholarly journals Draft Genome Sequence of Pediatric Otitis Media Isolate Streptococcus pneumoniae Strain EF3030, Which Forms In Vitro Biofilms That Closely Mimic In Vivo Biofilms

2019 ◽  
Vol 8 (2) ◽  
Author(s):  
Edgar J. Scott ◽  
Nicole R. Luke-Marshall ◽  
Anthony A. Campagnari ◽  
David W. Dyer
Keyword(s):  
Streptococcus Pneumoniae ◽  
Otitis Media ◽  
Genome Sequence ◽  
Dna Sequences ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Draft Assembly ◽  
Content Type

Here, we report the draft genome sequence of Streptococcus pneumoniae EF3030, a pediatric otitis media isolate active in biofilm assays of epithelial colonization. The final draft assembly included 2,209,198 bp; the annotation predicted 2,120 coding DNA sequences (CDSs), 4 complete rRNA operons, 58 tRNAs, 3 noncoding RNAs (ncRNAs), and 199 pseudogenes.

scholarly journals Draft Genome Sequence of Rhodoplanes sp. Strain T2.26MG-98, Isolated from 492.6 Meters Deep on the Subsurface of the Iberian Pyrite Belt

2019 ◽  
Vol 8 (16) ◽  
Author(s):  
N. Mariñán ◽  
José M. Martínez ◽  
T. Leandro ◽  
R. Amils
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Iberian Pyrite Belt ◽  
Draft Genome Sequence ◽  
Deep Subsurface

Rhodoplanes sp. strain T2.26MG-98 was isolated from the deep subsurface of the Iberian Pyrite Belt. We report its draft genome, consisting of 214 contigs with a chromosome of ∼5.6 Mb and a 53.7-kb plasmid.

scholarly journals Draft Genome Sequence of the Extremely Desiccation-Tolerant Cyanobacterium Gloeocapsopsis sp. Strain AAB1

2018 ◽  
Vol 6 (17) ◽  
Author(s):  
Fernando Puente-Sánchez ◽  
Carlos González-Silva ◽  
Victor Parro ◽  
Javier Tamames ◽  
Armando Azua-Bustos
Keyword(s):  
Genome Size ◽  
Genome Sequence ◽  
Dna Sequences ◽  
Draft Genome ◽  
Atacama Desert ◽  
Draft Genome Sequence ◽  
Rrna Genes ◽  
Trna Genes ◽  
Content Type

ABSTRACT Gloeocapsopsis sp. strain AAB1 is an extremely desiccation-tolerant cyanobacterium isolated from translucent quartz stones from the Atacama Desert (Chile). Here, we report its draft genome sequence, which consists of 137 contigs with an ∼5.4-Mb genome size. The annotation revealed 5,641 coding DNA sequences, 38 tRNA genes, and 5 rRNA genes.

scholarly journals Draft Genome Sequence of Lactiplantibacillus pentosus AWA1501, Isolated from Awa-bancha

2021 ◽  
Vol 10 (30) ◽  
Author(s):  
F. Ito ◽  
R. Niwa ◽  
Y. Syaputri ◽  
Y. Ikagawa ◽  
T. Mizuno ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Dna Sequences ◽  
Fermentation Process ◽  
Anaerobic Fermentation ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type

Lactiplantibacillus pentosus AWA1501 was isolated from the traditional Japanese tea Awa-bancha. Previous studies have reported that this species becomes predominant after the anaerobic fermentation process. In this study, we report the whole-genome sequence of this strain. The draft genome sequence comprises 3,714,221 nucleotides and 3,374 coding DNA sequences, with an average G+C content of 46.02%.

scholarly journals Draft Genome Sequence of Lactobacillus plantarum IYO1511, Isolated from Ishizuchi-Kurocha

2020 ◽  
Vol 9 (18) ◽  
Author(s):  
Ryo Niwa ◽  
Yolani Syaputri ◽  
Masanori Horie ◽  
Hitoshi Iwahashi
Keyword(s):  
Lactobacillus Plantarum ◽  
Genome Sequence ◽  
Dna Sequences ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Predominant Species

Lactobacillus plantarum IYO1511, isolated from a traditional postfermented tea, is a predominant species associated with Ishizuchi-kurocha. Here, we report the whole-genome sequence of this bacterium. The draft genome comprises 3,229,083 nucleotides and 3,044 coding DNA sequences (CDSs), with an average G+C content of 44.5%.

scholarly journals Draft Genome Sequence of Paenibacillus polymyxa 3A-25AI, a Strain Antagonist to Root Rot Causal Phytopathogens

2020 ◽  
Vol 9 (7) ◽  
Author(s):  
Jazmín López-Martínez ◽  
Yumiko De La Cruz-Rodríguez ◽  
Alejandro Alvarado-Gutiérrez ◽  
Miguel Alvarado-Rodríguez ◽  
Julio Vega-Arreguín ◽  
...  
Keyword(s):  
Rhizoctonia Solani ◽  
Genome Size ◽  
Genome Sequence ◽  
Dna Sequences ◽  
Root Rot ◽  
Phytophthora Capsici ◽  
Draft Genome ◽  
Paenibacillus Polymyxa ◽  
Draft Genome Sequence ◽  
Content Type

Here, we report the draft genome sequence of the Paenibacillus polymyxa 3A-25AI strain, isolated from the rhizosphere of wild grass. This strain inhibits Phytophthora capsici and Rhizoctonia solani phytopathogens. The genome size is 5.6 Mb, with a G+C content of 45.59%, and contains 5,079 genes, 4,968 coding DNA sequences (CDSs), 35 tRNAs, 3 rRNAs, and 72 unexpected miscellaneous RNA (miscRNA) features.

scholarly journals Draft Genome Sequence of Pseudarthrobacter sp. Strain ATCC 49442 (Formerly Micrococcus luteus), a Pyridine-Degrading Bacterium

2020 ◽  
Vol 9 (38) ◽  
Author(s):  
Nidhi Gupta ◽  
Kelly A. Skinner ◽  
Zarath M. Summers ◽  
Janaka N. Edirisinghe ◽  
Pamela B. Weisenhorn ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Micrococcus Luteus ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Strain Atcc ◽  
Genome Length ◽  
Content Type ◽  
Degrading Bacterium

ABSTRACT We present here the draft genome sequence of a pyridine-degrading bacterium, Micrococcus luteus ATCC 49442, which was reclassified as Pseudarthrobacter sp. strain ATCC 49442 based on its draft genome sequence. Its genome length is 4.98 Mbp, with 64.81% GC content.

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