scholarly journals Complete Genome Sequence of Caulobacter sp. Strain S6, Obtained Using Oxford Nanopore and Illumina Sequencing

2021 ◽  
Vol 10 (39) ◽  
Author(s):  
Cuiyang Zhang ◽  
Jun Huang ◽  
Wei Ouyang ◽  
Yongmei Li ◽  
Ying Tang ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Illumina Sequencing ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Oxford Nanopore

We report the complete genome sequence of Caulobacter sp. strain S6, generated from Oxford Nanopore and Illumina sequencing. The assembled genome comprises a chromosome with a length of 5.5 Mb and a plasmid of 96,014 bp.

scholarly journals Complete Genome Sequence of Campylobacter armoricus CA639, Which Carries Two Plasmids, Compiled Using Oxford Nanopore and Illumina Sequencing Technologies

2020 ◽  
Vol 9 (1) ◽  
Author(s):  
Amine M. Boukerb ◽  
Julien Schaeffer ◽  
Joëlle Serghine ◽  
Gregory Carrier ◽  
Françoise S. Le Guyader ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Illumina Sequencing ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Sequence Data ◽  
Hybrid Approach ◽  
Circular Chromosome ◽  
Sequencing Technologies ◽  
Oxford Nanopore

As determined by a hybrid approach combining Oxford Nanopore MinION and Illumina MiniSeq sequence data, Campylobacter armoricus strain CA639 harbored a circular chromosome of 1,688,169 bp with a G+C content of 28.47% and two plasmids named pCA639-1 and pCA639-2, with lengths of 51,123 and 28,139 bp, and G+C contents of 26.5% and 28.45%, respectively.

scholarly journals Complete Genome Sequence of a Streptococcus pyogenes Serotype M12 Scarlet Fever Outbreak Isolate from China, Compiled Using Oxford Nanopore and Illumina Sequencing

2018 ◽  
Vol 6 (18) ◽  
pp. e00389-18 ◽  
Author(s):  
Yuanhai You ◽  
Yongjun Kou ◽  
Longfei Niu ◽  
Qiong Jia ◽  
Yahui Liu ◽  
...  
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Streptococcus Pyogenes ◽  
Illumina Sequencing ◽  
Complete Genome Sequence ◽  
Scarlet Fever ◽  
Complete Genome ◽  
Content Type ◽  
Oxford Nanopore ◽  
Outbreak Isolate

ABSTRACT The incidence of scarlet fever cases remains high in China. Here, we report the complete genome sequence of a Streptococcus pyogenes isolate of serotype M12, which has been confirmed as the predominant serotype in recent outbreaks. Genome sequencing was achieved by a combination of Oxford Nanopore MinION and Illumina methodologies.

scholarly journals Complete Genome Sequence of Sandaracinobacter sp. Strain M6, Isolated from a Rocky Mountain in China

2021 ◽  
Vol 10 (1) ◽  
Author(s):  
Ying Tang ◽  
Jun Huang ◽  
Cuiyang Zhang ◽  
Shiyu Bi ◽  
Zhaohui Guo ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Illumina Sequencing ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gc Content ◽  
Rocky Mountain ◽  
Anoxygenic Phototrophs ◽  
Metabolic Characteristics ◽  
Oxford Nanopore ◽  
Taxonomic Studies

ABSTRACT We report the complete genome sequence of Sandaracinobacter sp. strain M6 obtained by Oxford Nanopore and Illumina sequencing. The approximately 3.4-Mb genome sequence with a GC content of 67.65% provides essential data for future taxonomic studies and information for further investigating the metabolic characteristics of aerobic anoxygenic phototrophs.

scholarly journals Complete Genome Sequence of Rubrobacter xylanophilus Strain AA3-22, Isolated from Arima Onsen in Japan

2019 ◽  
Vol 8 (34) ◽  
Author(s):  
Natsuki Tomariguchi ◽  
Kentaro Miyazaki
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Hot Spring ◽  
Sequencing Data ◽  
Short Read ◽  
Content Type ◽  
Short Read Sequencing ◽  
Oxford Nanopore ◽  
Long Read

Rubrobacter xylanophilus strain AA3-22, belonging to the phylum Actinobacteria, was isolated from nonvolcanic Arima Onsen (hot spring) in Japan. Here, we report the complete genome sequence of this organism, which was obtained by combining Oxford Nanopore long-read and Illumina short-read sequencing data.

scholarly journals Complete Genome Sequence of the Autotrophic Acetogen Clostridium formicaceticum DSM 92T Using Nanopore and Illumina Sequencing Data

2017 ◽  
Vol 5 (21) ◽  
Author(s):  
Michael M. Karl ◽  
Anja Poehlein ◽  
Frank R. Bengelsdorf ◽  
Rolf Daniel ◽  
Peter Dürre
Keyword(s):  
Carbon Monoxide ◽  
Genome Sequence ◽  
Illumina Sequencing ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Sequencing Data ◽  
Circular Chromosome ◽  
Content Type ◽  
Illumina Sequencing Data

ABSTRACT Here, we report the closed genome sequence of Clostridium formicaceticum, an Rnf- and cytochrome-containing autotrophic acetogen that is able to convert carbon monoxide to acetate using the Wood-Ljungdahl pathway. The genome consists of a circular chromosome (4.59 Mb).

scholarly journals Complete Genome Sequence of wBp, the Wolbachia Endosymbiont of Brugia pahangi FR3

2020 ◽  
Vol 9 (27) ◽  
Author(s):  
Jarrett F. Lebov ◽  
John Mattick ◽  
Silvia Libro ◽  
Benjamin C. Sparklin ◽  
Matthew Chung ◽  
...  
Keyword(s):  
Lymphatic Filariasis ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Filarial Nematode ◽  
Brugia Pahangi ◽  
Content Type ◽  
Pacific Biosciences ◽  
Oxford Nanopore ◽  
Wolbachia Endosymbiont

ABSTRACT Lymphatic filariasis is a devastating disease caused by filarial nematode roundworms, which contain obligate Wolbachia endosymbionts. Here, we assembled the genome of wBp, the Wolbachia endosymbiont of the filarial nematode Brugia pahangi, from Illumina, Pacific Biosciences, and Oxford Nanopore data. The complete, circular genome is 1,072,967 bp.

scholarly journals Complete Genome Sequence of the Plant Pathogen Ralstonia solanacearum Strain CIAT-078, Isolated in Colombia, Obtained Using Oxford Nanopore Technology

2020 ◽  
Vol 9 (22) ◽  
Author(s):  
Diana López-Alvarez ◽  
Ana M. Leiva ◽  
Israel Barrantes ◽  
Juan M. Pardo ◽  
Viviana Dominguez ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Plant Pathogen ◽  
Ralstonia Solanacearum ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Causal Agent ◽  
Content Type ◽  
Solanacearum Strain ◽  
Oxford Nanopore

ABSTRACT Moko is one of the main diseases affecting banana and plantain in Colombia. Here, we report the genome sequence of the causal agent, the bacterium Ralstonia solanacearum (Smith) strain CIAT-078, collected in 2004 from affected plantains in central-west Colombia. The assembled genome was obtained using Oxford Nanopore Technology.

scholarly journals Complete Genome Sequence of Streptomyces lunaelactis MM109T, Isolated from Cave Moonmilk Deposits

2018 ◽  
Vol 6 (21) ◽  
Author(s):  
Aymeric Naômé ◽  
Marta Maciejewska ◽  
Magdalena Calusinska ◽  
Loïc Martinet ◽  
Sinaeda Anderssen ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Illumina Hiseq ◽  
Linear Chromosome ◽  
Content Type ◽  
Oxford Nanopore

ABSTRACT Streptomyces lunaelactis MM109T is a ferroverdin A (anticholesterol) producer isolated from cave moonmilk deposits. The complete genome sequence of MM109T was obtained by combining Oxford Nanopore MinION and Illumina HiSeq and MiSeq technologies, revealing an 8.4-Mb linear chromosome and two plasmids, pSLUN1 (127,264 bp, linear) and pSLUN2 (46,827 bp, circular).

scholarly journals Complete Genome Sequence of Pasteurella multocida HuN001, a Capsular Type A Strain from a Human

2021 ◽  
Vol 10 (26) ◽  
Author(s):  
Lin Lin ◽  
Chunhui Li ◽  
Fei Wang ◽  
Xueying Wang ◽  
Yue Zhang ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Pasteurella Multocida ◽  
Sputum Sample ◽  
Capsular Type ◽  
Circular Chromosome ◽  
Content Type ◽  
Oxford Nanopore ◽  
Oxford Nanopore Technologies

Here, we report the complete genome sequence of clinical Pasteurella multocida strain HuN001, which was cultured from a sputum sample from a patient with pneumonia. Oxford Nanopore Technologies sequencing provided a complete genome sequence of P. multocida HuN001, which contains a 2,287,216-bp circular chromosome with an average G+C content of 40.33%.

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