scholarly journals Draft Genome Sequence of Burkholderia vietnamiensis Strain RS1, a Nitrogen-Fixing Endophyte Isolated from Sweet Potato

2018 ◽  
Vol 7 (3) ◽  
Author(s):  
Rina Shinjo ◽  
Kazuma Uesaka ◽  
Kunio Ihara ◽  
Shunsuke Sakazaki ◽  
Katsuya Yano ◽  
...  
Keyword(s):  
Nitrogen Fixation ◽  
Sweet Potato ◽  
Genome Sequence ◽  
Draft Genome ◽  
Endophytic Bacterium ◽  
Draft Genome Sequence ◽  
Nitrogen Fixing ◽  
Content Type ◽  
Burkholderia Vietnamiensis ◽  
Tuberous Roots

Burkholderia vietnamiensis strain RS1 is an endophytic bacterium with nitrogen-fixing ability that was isolated from tuberous roots of sweet potato. Here, we present its draft genome of 6,542,727 bases that contains a cluster of genes associated with nitrogen fixation.

scholarly journals Draft Genome Sequence of the Nitrogen-Fixing Endophyte Azoarcus communis SWub3

2018 ◽  
Vol 7 (13) ◽  
Author(s):  
Violeta Zorraquino ◽  
David Toubiana ◽  
Dawei Yan ◽  
Eduardo Blumwald
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Nitrogen Fixing ◽  
Content Type ◽  
Kallar Grass ◽  
Root Tissues

Here we report a draft genome sequence of Azoarcus communis SWub3, a nitrogen-fixing bacterium isolated from root tissues of Kallar grass in Pakistan.

scholarly journals Draft Genome Sequence of Bacillus pumilus Strain GM3FR, an Endophyte Isolated from Aerial Plant Tissues of Festuca rubra L

2017 ◽  
Vol 5 (13) ◽  
Author(s):  
Jacqueline Hollensteiner ◽  
Anja Poehlein ◽  
Rolf Daniel ◽  
Heiko Liesegang ◽  
Stefan Vidal ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Bacillus Pumilus ◽  
Draft Genome ◽  
Endophytic Bacterium ◽  
Draft Genome Sequence ◽  
Plant Tissues ◽  
Festuca Rubra ◽  
Content Type ◽  
Protein Encoding ◽  
Biocontrol Potential

ABSTRACT Here, we report the draft genome sequence of Bacillus pumilus GM3FR, an endophytic bacterium isolated from aerial plant tissues of Festuca rubra L. The draft genome consists of 3.5 Mb and harbors 3,551 predicted protein-encoding genes. The genome provides insights into the biocontrol potential of B. pumilus GM3FR.

scholarly journals Draft Genome Sequence of Bradyrhizobium elkanii TnphoA 33, a Producer of Polyhydroxyalkanoates

2017 ◽  
Vol 5 (8) ◽  
Author(s):  
Erica M. Lopes ◽  
Luciano T. Kishi ◽  
Camila C. Fernandes ◽  
Fernanda Larozza Paganelli ◽  
Lucia M. C. Alves ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Genome Assembly ◽  
Draft Genome ◽  
Open Reading Frames ◽  
Draft Genome Sequence ◽  
Nitrogen Fixing ◽  
Content Type ◽  
Draft Genome Assembly ◽  
Bradyrhizobium Elkanii ◽  
Reading Frames

ABSTRACT The genus Bradyrhizobium comprises bacteria with the ability to form nitrogen-fixing symbioses with legumes. They are of great interest in agriculture, as well as for the production of biopolymers such as polyhydroxyalkanoates. Here, we report the draft genome assembly of Bradyrhizobium elkanii TnphoA 33 comprising 9 Mb, 1,124 contigs, and 9,418 open reading frames.

scholarly journals Draft Genome Sequence of the Endophytic Bacterium Variovorax paradoxus KB5, Which Has Antagonistic Activity against a Phytopathogen, Pseudomonas syringae pv. tomato DC3000

2017 ◽  
Vol 5 (36) ◽  
Author(s):  
Chi Eun Hong ◽  
Sung Hee Jo ◽  
Ick-Hyun Jo ◽  
Haeyoung Jeong ◽  
Jeong Mee Park
Keyword(s):  
Pseudomonas Syringae ◽  
Genome Sequence ◽  
Draft Genome ◽  
Endophytic Bacterium ◽  
Biosynthetic Gene Cluster ◽  
Antagonistic Activity ◽  
Draft Genome Sequence ◽  
Tomato Dc3000 ◽  
Content Type ◽  
Variovorax Paradoxus

ABSTRACT Variovorax paradoxus KB5, isolated from the inside of Arabidopsis thaliana leaves, showed antibacterial activity against the phytopathogen Pseudomonas syringae pv. tomato DC3000. Here, we report a draft genome sequence of V. paradoxus KB5, which contains a delftibactin-like nonribosomal peptide biosynthetic gene cluster.

scholarly journals Draft Genome Sequence of Bradyrhizobium sp. Strain LVM 105, a Nitrogen-Fixing Symbiont of Chamaecrista fasciculata (Michx.) Greene

2019 ◽  
Vol 8 (14) ◽  
Author(s):  
Hari B. Krishnan ◽  
Won-Seok Kim ◽  
Scott A. Givan
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Soil Bacterium ◽  
Draft Genome Sequence ◽  
Nitrogen Fixing ◽  
Chamaecrista Fasciculata ◽  
Content Type ◽  
Bradyrhizobium Sp ◽  
Partridge Pea

Here, we present the draft genome sequence of Bradyrhizobium sp. strain LVM 105, a soil bacterium that forms nitrogen-fixing nodules on the roots of partridge pea.

scholarly journals Draft Genome Sequence of Bradyrhizobium elkanii Strain SEMIA 938, Used in Commercial Inoculants for Lupinus spp. in Brazil

2019 ◽  
Vol 8 (28) ◽  
Author(s):  
Mariangela Hungria ◽  
Jakeline Renata Marçon Delamuta ◽  
Renan Augusto Ribeiro ◽  
Marco Antonio Nogueira
Keyword(s):  
Nitrogen Fixation ◽  
Genome Sequence ◽  
Draft Genome ◽  
High Capacity ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Nodulation Genes ◽  
Bradyrhizobium Elkanii ◽  
Commercial Inoculants

Due to its high capacity for nitrogen fixation, strain SEMIA 938 is used in commercial inoculants for lupins in Brazil. Its genome was estimated at 8,780,064 bp and indicates that it belongs to the Bradyrhizobium elkanii species, while the analysis of nodulation genes classifies the strain in the symbiovar sojae.

scholarly journals Draft Genome Sequence of Paraburkholderia sp. UYCP14C, a Rhizobium Strain Isolated from Root Nodules of Calliandra parvifolia

2019 ◽  
Vol 8 (16) ◽  
Author(s):  
Mauricio Langleib ◽  
Martín Beracochea ◽  
María Zabaleta ◽  
Federico Battistoni ◽  
José Sotelo-Silveira ◽  
...  
Keyword(s):  
Nitrogen Fixation ◽  
Genome Size ◽  
Genome Sequence ◽  
Root Nodules ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Rhizobium Strain ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type

Here, we present the draft genome sequence of strain UYCP14C, a rhizobium isolated from Calliandra parvifolia nodules. The assembled genome size was around 9.8 million bp, containing 9,031 predicted protein-coding sequences, including several symbiotic and nitrogen fixation genes.

scholarly journals Draft Genome Sequence for Frankia sp. Strain BMG5.11, a Nitrogen-Fixing Bacterium Isolated from Elaeagnus angustifolia

2020 ◽  
Vol 9 (37) ◽  
Author(s):  
Faten Ghodhbane-Gtari ◽  
Erik Swanson ◽  
Abdellatif Gueddou ◽  
Stephen Simpson ◽  
Krystalynne Morris ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Actinorhizal Plants ◽  
Draft Genome Sequence ◽  
Elaeagnus Angustifolia ◽  
Nitrogen Fixing ◽  
Content Type ◽  
Protein Encoding ◽  
Candidate Protein ◽  
Encoding Genes

ABSTRACT Frankia sp. strain BMG5.11, which was isolated from Elaeagnus angustifolia nodules, is able to infect other actinorhizal plants, including Elaeagnaceae, Rhamnaceae, Colletieae, Gymnostoma, and Myricaceae. Here, we report the 11.3-Mbp draft genome sequence of Frankia sp. strain BMG5.11, with a G+C content of 69.9% and 9,926 candidate protein-encoding genes.

scholarly journals Draft Genome Sequence of Kosakonia radicincitans UYSO10, an Endophytic Plant Growth-Promoting Bacterium of Sugarcane (Saccharum officinarum)

2019 ◽  
Vol 8 (43) ◽  
Author(s):  
Martín Beracochea ◽  
Cecilia Taulé ◽  
Federico Battistoni
Keyword(s):  
Plant Growth ◽  
Genome Sequence ◽  
Indoleacetic Acid ◽  
Draft Genome ◽  
Endophytic Bacterium ◽  
Saccharum Officinarum ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Plant Growth Promoting ◽  
Growth Promoting

Kosakonia radicincitas UYSO10 is an endophytic bacterium that was isolated from stem tissues of Saccharum officinarum plants cultivated in Uruguay. UYSO10 is a diazotrophic indoleacetic acid-producing bacterium with growth-promoting effects on sugarcane. Here, we report the draft genome sequence, in which genes that are probably involved in the plant-bacterium interaction were identified.

scholarly journals Draft Genome Sequence of Raphidiopsis raciborskii Strain GIHE 2018, Isolated from a Shallow Freshwater Pond in South Korea

2020 ◽  
Vol 9 (6) ◽  
Author(s):  
Ju-Yong Jeong ◽  
Sang-Hoon Lee ◽  
Mi-Ra Yun ◽  
Seung-Eun Oh ◽  
Chan-Won Hwang ◽  
...  
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Nitrogen Fixing ◽  
Content Type ◽  
Freshwater Pond

The draft genome sequence of Raphidiopsis (Cylindrospermopsis) raciborskii strain GIHE 2018, a filamentous nitrogen-fixing and potentially harmful cyanobacterium, is reported here. This is the first strain isolated from a shallow freshwater pond in South Korea. This information is expected to improve our understanding of the phylogeography of this species.

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