scholarly journals First Genome Sequence of Pasteurella multocida Type B Strain BAUTB2, a Major Pathogen Responsible for Mortality of Bovines in Bangladesh

2018 ◽  
Vol 7 (9) ◽  
Author(s):  
M. Shahjahan Ali Sarker ◽  
M. Tanvir Rahman ◽  
M. Muket Mahmud ◽  
Massimiliano S. Tagliamonte ◽  
Shah M. Ziqrul Haq Chowdhury ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Pasteurella Multocida ◽  
Noncoding Rnas ◽  
Gc Content ◽  
Genome Length ◽  
Type B ◽  
Illumina Hiseq ◽  
Coding Sequences ◽  
Content Type

Here, we report the first genome sequence of Pasteurella multocida BAUTB2 isolated from a buffalo that died from hemorrhagic septicemia in Rajshahi, Bangladesh. Using Illumina HiSeq technology, the BAUTB2 genome length was determined to be 2,439,149 bp, with 40.8% GC content, 2,307 coding sequences (CDS), 6 rRNAs, 51 tRNAs, and 4 noncoding RNAs (ncRNAs).

scholarly journals Draft Genome Sequence of Limisphaera ngatamarikiensis NGM72.4T, a Moderately Alkaliphilic Thermophile Belonging to the Class Verrucomicrobiae

2020 ◽  
Vol 9 (18) ◽  
Author(s):  
Carlo R. Carere ◽  
Jason A. Steen ◽  
Philip Hugenholtz ◽  
Matthew B. Stott
Keyword(s):  
New Zealand ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Rrna Genes ◽  
Trna Genes ◽  
Illumina Hiseq ◽  
Coding Sequences ◽  
Content Type ◽  
Aotearoa New Zealand

Limisphaera ngatamarikiensis NGM72.4T is a thermophilic representative of the class Verrucomicrobiae. Isolated from geothermally heated subaqueous clay sediments from a Ngatamariki hotspring in Aotearoa New Zealand, the 3,908,748-bp genome was sequenced using the Illumina HiSeq 2500 platform. Annotation revealed 3,083 coding sequences, including 3,031 proteins, 3 rRNA genes, and 46 tRNA genes.

scholarly journals Complete Genome Sequence of Ureibacillus thermosphaericus A1, a Thermophilic Bacillus Isolated from Compost

2017 ◽  
Vol 5 (38) ◽  
Author(s):  
Hironaga Akita ◽  
Zen-ichiro Kimura ◽  
Akinori Matsushika
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gc Content ◽  
Coding Sequences ◽  
Content Type ◽  
Thermophilic Bacillus ◽  
Fukuoka Prefecture ◽  
Ureibacillus Thermosphaericus

ABSTRACT Ureibacillus thermosphaericus A1 was isolated from compost collected in Munakata City, Fukuoka Prefecture, Japan. Here, we report the first complete genome sequence of U. thermosphaericus. The complete genome of this strain consists of 3,488,104 bp with a GC content of 36.3% and comprises 3,362 predicted coding sequences.

scholarly journals Draft Genome Sequence of Brevibacillus sp. Strain LEMMJ03, Isolated from an Antarctic Volcano

2019 ◽  
Vol 8 (40) ◽  
Author(s):  
Júnia Schultz ◽  
René Kallies ◽  
Ulisses Nunes da Rocha ◽  
Alexandre Soares Rosado
Keyword(s):  
Genome Sequence ◽  
Aromatic Compounds ◽  
Draft Genome ◽  
Noncoding Rnas ◽  
Draft Genome Sequence ◽  
Deception Island ◽  
Coding Sequences ◽  
Content Type

Here, we announce the draft genome sequence of Brevibacillus sp. strain LEMMJ03, isolated from Whalers Bay sediment (Deception Island, Antarctica). In total, 4,500 coding sequences (CDS), among those 102 coding for tRNAs and 5 for noncoding RNAs (ncRNAs), were predicted from the 4.64-Mb genome. Predicted functions were for bacteriocin and degradation of aromatic compounds.

scholarly journals Complete Genome Sequence of Pseudomonas sp. Strain MM213, an Isolate from a Brookside in Bielefeld, Germany

2022 ◽  
Author(s):  
Bart Verwaaijen ◽  
Özgülen Cevahir ◽  
Fabian Hitz ◽  
Jacqueline Römmich ◽  
Donat Wulf
Keyword(s):  
Genome Size ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gc Content ◽  
Pseudomonas Sp ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type ◽  
Pseudomonas Mandelii

Here, we report the complete genome sequence of Pseudomonas sp. strain MM213 of the Pseudomonas mandelii group, which was isolated from a brookside in Bielefeld, Germany. The genome size is 6,746,355 bp, with a GC content of 59.4% and 6,145 predicted protein-coding sequences.

scholarly journals Complete Genome Sequence of Broad-Host-Range Staphylococcus aureus Myophage ESa1

2020 ◽  
Vol 9 (30) ◽  
Author(s):  
Roshan D’Souza ◽  
Andrey A. Filippov ◽  
Kirill V. Sergueev ◽  
Yunxiu He ◽  
Amanda M. Ward ◽  
...  
Keyword(s):  
Staphylococcus Aureus ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gc Content ◽  
Illumina Miseq ◽  
Broad Host Range ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type

ABSTRACT A potentially therapeutic Twort-like myophage, Esa1, with specificity toward Staphylococcus aureus was isolated from lake water. We report the complete genome sequence of ESa1, assembled using both MinION and Illumina MiSeq reads, consisting of 153,106 bp, with 30.3% GC content, 253 protein coding sequences, 4 tRNAs, and 10,437-bp direct terminal repeats.

scholarly journals Draft Genome Sequence of Vibrio parahaemolyticus Strain VP14, Isolated from a Penaeus vannamei Culture Farm

2018 ◽  
Vol 6 (11) ◽  
Author(s):  
Ashok Kumar Jangam ◽  
T. Bhuvaneswari ◽  
A. Navaneeth Krishnan ◽  
Vinaya Kumar Katneni ◽  
Satheesha Avunje ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Vibrio Parahaemolyticus ◽  
Draft Genome ◽  
Gc Content ◽  
Southern India ◽  
Draft Genome Sequence ◽  
Penaeus Vannamei ◽  
Parahaemolyticus Strain ◽  
Coding Sequences ◽  
Content Type

ABSTRACT Here, we report the draft genome sequence of an isolate of Vibrio parahaemolyticus , VP14, recovered from the gut of Penaeus vannamei shrimp farmed in southern India. The genome of VP14 comprised 5,224,046 bp with a GC content of 45.3% and contained 5,326 genes, including 4,972 coding sequences.

scholarly journals Draft Genome Sequence of Phyllobacterium endophythicum mTS5, Isolated from Lupinus micranthus in Tunisia

2019 ◽  
Vol 8 (45) ◽  
Author(s):  
Zoé Waller ◽  
Mokhtar Rejili ◽  
Mohamed Mars ◽  
Andreas Brachmann ◽  
Macarena Marín
Keyword(s):  
Genome Sequence ◽  
Root Nodule ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type

We report here the draft genome sequence of Phyllobacterium endophyticum mTS5, isolated from a Lupinus micranthus root nodule. The genome consists of 5,454,168 bp, with a GC content of 57%, and contains 5,676 protein-coding sequences.

scholarly journals Draft Genome Sequence of Pseudarthrobacter sp. Strain ATCC 49442 (Formerly Micrococcus luteus), a Pyridine-Degrading Bacterium

2020 ◽  
Vol 9 (38) ◽  
Author(s):  
Nidhi Gupta ◽  
Kelly A. Skinner ◽  
Zarath M. Summers ◽  
Janaka N. Edirisinghe ◽  
Pamela B. Weisenhorn ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Micrococcus Luteus ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Strain Atcc ◽  
Genome Length ◽  
Content Type ◽  
Degrading Bacterium

ABSTRACT We present here the draft genome sequence of a pyridine-degrading bacterium, Micrococcus luteus ATCC 49442, which was reclassified as Pseudarthrobacter sp. strain ATCC 49442 based on its draft genome sequence. Its genome length is 4.98 Mbp, with 64.81% GC content.

scholarly journals Draft Genome Sequence of Entomopathogenic Brevibacillus laterosporus Strain Lak 1210, an Alkaliphilic Chitin Degrader

2017 ◽  
Vol 5 (46) ◽  
Author(s):  
Lakshmi Prasanna ◽  
Tushar Ranjan Moharana ◽  
Nizamuddin Sheikh ◽  
Veerabhadra Rao Arravapalli ◽  
Thangaraj Kumaraswamy ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Phytopathogenic Fungi ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type ◽  
Brevibacillus Laterosporus ◽  
Mangrove Soil

ABSTRACT We announce here the draft genome sequence of Brevibacillus laterosporus strain Lak 1210, isolated from mangrove soil. This alkaliphilic strain is an efficient chitin degrader and has the ability to control insects and inhibit phytopathogenic fungi. The assembly consists of 5,082,926 bp, with 4,321 protein-coding sequences and a GC content of 41.15%.

scholarly journals Draft Genome Sequence of Cronobacter sakazakii GP1999, Sequence Type 145, an Epiphytic Isolate Obtained from the Tomato’s Rhizoplane/Rhizosphere Continuum

2017 ◽  
Vol 5 (31) ◽  
Author(s):  
Hannah R. Chase ◽  
Leo Eberl ◽  
Roger Stephan ◽  
HyeJin Jeong ◽  
Chaeyoon Lee ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
Cronobacter Sakazakii ◽  
Tomato Plants ◽  
Coding Sequences ◽  
Content Type ◽  
A Genome

ABSTRACT We present here the draft genome of Cronobacter sakazakii GP1999, a sequence type 145 strain isolated from the rhizosphere of tomato plants. Assembly and annotation of the genome resulted in a genome of 4,504,670 bp in size, with 4,148 coding sequences, and a GC content of 56.8%.

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