scholarly journals Complete Genome Sequence of Escherichia coli Siphophage BRET

2019 ◽  
Vol 8 (5) ◽  
Author(s):  
Solange Ngazoa-Kakou ◽  
Yuyu Shao ◽  
Geneviève M. Rousseau ◽  
Audrey A. Addablah ◽  
Denise M. Tremblay ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Cote D'ivoire ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Côte D’Ivoire ◽  
Gc Content ◽  
Local Market ◽  
Cote D’Ivoire ◽  
Content Type

The lytic Escherichia coli siphophage BRET was isolated from a chicken obtained at a local market in Abidjan, Côte d’Ivoire. Its linear genome sequence consists of 59,550 bp (43.4% GC content) and contains 88 predicted genes, including 4 involved in archaeosine biosynthesis.

scholarly journals Complete Genome Sequence of Ebrios, a Novel T7virus Isolated from the Ebrie Lagoon in Abidjan, Côte d’Ivoire

2018 ◽  
Vol 6 (25) ◽  
Author(s):  
Solange Ngazoa-Kakou ◽  
Cécile Philippe ◽  
Denise M. Tremblay ◽  
Stéphanie Loignon ◽  
Aristide Koudou ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Cote D'ivoire ◽  
Complete Genome Sequence ◽  
Stenotrophomonas Maltophilia ◽  
Côte D’Ivoire ◽  
Open Reading Frames ◽  
Cote D’Ivoire ◽  
Content Type ◽  
Côte D'ivoire ◽  
Reading Frames

ABSTRACT The lytic Escherichia coli phage Ebrios was isolated from a water sample collected in Ebrie Lagoon on the Adiopodoumé River in Abidjan (Republic of Côte d’Ivoire, West Africa). The linear genome of this Podoviridae family member contains 39,752 bp, has a G+C content of 52.9%, is composed of 53 open reading frames, and is related to the Stenotrophomonas maltophilia phage IME15.

scholarly journals Complete Genome Sequence of Streptococcus pneumoniae Strain Rx1, a Hex Mismatch Repair-Deficient Standard Transformation Recipient

2021 ◽  
Vol 10 (41) ◽  
Author(s):  
Anna Maria Cuppone ◽  
Lorenzo Colombini ◽  
Valeria Fox ◽  
David Pinzauti ◽  
Francesco Santoro ◽  
...  
Keyword(s):  
Streptococcus Pneumoniae ◽  
Mismatch Repair ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gc Content ◽  
Open Reading Frames ◽  
Circular Chromosome ◽  
Content Type ◽  
Sequencing Technologies

The complete genome sequence of Streptococcus pneumoniae strain Rx1, a Hex mismatch repair-deficient standard transformation recipient, was obtained by combining Nanopore and Illumina sequencing technologies. The genome consists of a 2.03-Mb circular chromosome, with 2,054 open reading frames and a GC content of 39.72%.

scholarly journals Complete Genome Sequence of Escherichia coli O157:H7 Phage PhiG17

2019 ◽  
Vol 8 (3) ◽  
Author(s):  
Muyiwa A. Akindolire ◽  
Bukola R. Aremu ◽  
Collins N. Ateba
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Whole Genome Sequence ◽  
Escherichia Coli O157 ◽  
Content Type ◽  
North West ◽  
The North ◽  
Genetic Features

Here, we announce the complete genome sequence of bacteriophage PhiG17, which is virulent to Escherichia coli O157:H7 strains and was isolated from cattle feces in the North West province of South Africa. This report presents the major genetic features of the phage PhiG17 based on its whole-genome sequence.

scholarly journals Complete Genome Sequence of Proteus mirabilis Phage Mydo

2019 ◽  
Vol 8 (47) ◽  
Author(s):  
Benjamin T. Jones ◽  
Lauren Lessor ◽  
Chandler O’Leary ◽  
Jason Gill ◽  
Mei Liu
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Proteus Mirabilis ◽  
Nosocomial Infections ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Antibiotic Resistant ◽  
Content Type ◽  
Resistant Strains

Proteus mirabilis is a pathogen that has been linked to nosocomial infections. Studies on phages infecting P. mirabilis may provide therapeutics for infections caused by antibiotic-resistant strains of this pathogen. Here, we announce the complete genome sequence of a P. mirabilis myophage, Mydo, which is distantly related to Escherichia coli phage rv5.

scholarly journals Complete Genome Sequence of Enterotoxigenic Escherichia coli Podophage LL11

2019 ◽  
Vol 8 (32) ◽  
Author(s):  
Matthew Theodore ◽  
Lauren Lessor ◽  
Chandler O’Leary ◽  
Rohit Kongari ◽  
Jason Gill ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Alternative Treatment ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Opportunistic Pathogen ◽  
Foodborne Illness ◽  
Enterotoxigenic Escherichia Coli ◽  
Content Type ◽  
Illness Study

Enterotoxigenic Escherichia coli (ETEC) is an opportunistic pathogen that commonly causes foodborne illness. Study of bacteriophages against this pathogen could be useful to develop alternative treatment approaches. Here, we present the complete genome sequence of LL11, a T7-like podophage that infects ETEC.

scholarly journals Complete Genome Sequence of Enterotoxigenic Escherichia coli Siphophage LL5

2019 ◽  
Vol 8 (27) ◽  
Author(s):  
Denish Piya ◽  
Lauren Lessor ◽  
Mei Liu ◽  
Jason J. Gill
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Enterotoxigenic Escherichia Coli ◽  
Content Type ◽  
Traveler’S Diarrhea ◽  
Traveler's Diarrhea

ABSTRACT Here, we describe the complete genome sequence of siphophage LL5. LL5 is a T1-like phage isolated against enterotoxigenic Escherichia coli, which causes traveler’s diarrhea. LL5 is included as a component phage in the commercial prebiotic product PreforPro.

scholarly journals Complete Genome Sequence of Ureibacillus thermosphaericus A1, a Thermophilic Bacillus Isolated from Compost

2017 ◽  
Vol 5 (38) ◽  
Author(s):  
Hironaga Akita ◽  
Zen-ichiro Kimura ◽  
Akinori Matsushika
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gc Content ◽  
Coding Sequences ◽  
Content Type ◽  
Thermophilic Bacillus ◽  
Fukuoka Prefecture ◽  
Ureibacillus Thermosphaericus

ABSTRACT Ureibacillus thermosphaericus A1 was isolated from compost collected in Munakata City, Fukuoka Prefecture, Japan. Here, we report the first complete genome sequence of U. thermosphaericus. The complete genome of this strain consists of 3,488,104 bp with a GC content of 36.3% and comprises 3,362 predicted coding sequences.

scholarly journals Complete Genome Sequence of Escherichia coli Siphophage Shashou

2019 ◽  
Vol 8 (40) ◽  
Author(s):  
Tyler Higbee ◽  
Shih-Hung Yang ◽  
Russell Moreland ◽  
Mei Liu ◽  
Jolene Ramsey
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Content Type

Here, we announce the genome of the Escherichia coli 4s siphophage Shashou, which presents similarity to members of the Guernseyvirinae subfamily. Shashou is predicted to use a headful packaging mechanism for its 44,155-bp genome and to encode 77 proteins.

scholarly journals Complete Genome Sequence and Methylome of the Type Strain of Shewanella algae

2021 ◽  
Vol 10 (31) ◽  
Author(s):  
Christian Tellgren-Roth ◽  
Kaisa Thorell ◽  
Michael Y. Galperin ◽  
Tino Krell ◽  
Ute Römling ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Gc Content ◽  
Single Chromosome ◽  
Content Type ◽  
Base Modification ◽  
Shewanella Algae

We report the complete genome sequence and base modification analysis of the Shewanella algae type strain CECT 5071 (= OK-1 = ATCC 51192 = DSM 9167 = IAM 14159). The genome is composed of a single chromosome of 4,924,764 bp, with a GC content of 53.10%.

scholarly journals Escherichia coli Serotype O157:H7 PA20R2R Complete Genome Sequence

2020 ◽  
Vol 9 (50) ◽  
Author(s):  
Gaylen A. Uhlich ◽  
George C. Paoli ◽  
Siddhartha Kanrar
Keyword(s):  
Escherichia Coli ◽  
Transcription Factor ◽  
Clinical Isolate ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Biofilm Formation ◽  
Complete Genome ◽  
Stress Adaptation ◽  
Coding Region ◽  
Content Type

Escherichia coli serotype O157:H7 strain 20R2R is a derivative of clinical isolate PA20. Prophage excision from the coding region of a PA20 transcription factor restored RpoS-dependent biofilm formation in 20R2R, providing a model for O157:H7 stress adaptation when transitioning between clinical and environmental settings. We report here the complete 20R2R genome sequence.

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