scholarly journals Meta-Path Graphical Lasso for Learning Heterogeneous Connectivities

Author(s):  
Yao Zhang ◽  
Yun Xiong ◽  
Xinyue Liu ◽  
Xiangnan Kong ◽  
Yangyong Zhu
Keyword(s):  
2021 ◽  
Vol 25 (3) ◽  
pp. 711-738
Author(s):  
Phu Pham ◽  
Phuc Do

Link prediction on heterogeneous information network (HIN) is considered as a challenge problem due to the complexity and diversity in types of nodes and links. Currently, there are remained challenges of meta-path-based link prediction in HIN. Previous works of link prediction in HIN via network embedding approach are mainly focused on exploiting features of node rather than existing relations in forms of meta-paths between nodes. In fact, predicting the existence of new links between non-linked nodes is absolutely inconvincible. Moreover, recent HIN-based embedding models also lack of thorough evaluations on the topic similarity between text-based nodes along given meta-paths. To tackle these challenges, in this paper, we proposed a novel approach of topic-driven multiple meta-path-based HIN representation learning framework, namely W-MMP2Vec. Our model leverages the quality of node representations by combining multiple meta-paths as well as calculating the topic similarity weight for each meta-path during the processes of network embedding learning in content-based HINs. To validate our approach, we apply W-TMP2Vec model in solving several link prediction tasks in both content-based and non-content-based HINs (DBLP, IMDB and BlogCatalog). The experimental outputs demonstrate the effectiveness of proposed model which outperforms recent state-of-the-art HIN representation learning models.


Inventions ◽  
2021 ◽  
Vol 6 (3) ◽  
pp. 52
Author(s):  
Rajan Kapoor ◽  
Aniruddha Datta ◽  
Michael Thomson

Conventional breeding approaches that focus on yield under highly favorable nutrient conditions have resulted in reduced genetic and trait diversity in crops. Under the growing threat from climate change, the mining of novel genes in more resilient varieties can help dramatically improve trait improvement efforts. In this work, we propose the use of the joint graphical lasso for discovering genes responsible for desired phenotypic traits. We prove its efficiency by using gene expression data for wild type and delayed flowering mutants for the model plant. Arabidopsis thaliana shows that it recovers the mutation causing genes LNK1 and LNK2. Some novel interactions of these genes were also predicted. Observing the network level changes between two phenotypes can also help develop meaningful biological hypotheses regarding the novel functions of these genes. Now that this data analysis strategy has been validated in a model plant, it can be extended to crop plants to help identify the key genes for beneficial traits for crop improvement.


Author(s):  
Yiqing Wu ◽  
Ying Sun ◽  
Fuzhen Zhuang ◽  
Deqing Wang ◽  
Xiangliang Zhang ◽  
...  
Keyword(s):  

Electronics ◽  
2021 ◽  
Vol 10 (14) ◽  
pp. 1671
Author(s):  
Jibing Gong ◽  
Cheng Wang ◽  
Zhiyong Zhao ◽  
Xinghao Zhang

In MOOCs, generally speaking, curriculum designing, course selection, and knowledge concept recommendation are the three major steps that systematically instruct users to learn. This paper focuses on the knowledge concept recommendation in MOOCs, which recommends related topics to users to facilitate their online study. The existing approaches only consider the historical behaviors of users, but ignore various kinds of auxiliary information, which are also critical for user embedding. In addition, traditional recommendation models only consider the immediate user response to the recommended items, and do not explicitly consider the long-term interests of users. To deal with the above issues, this paper proposes AGMKRec, a novel reinforced concept recommendation model with a heterogeneous information network. We first clarify the concept recommendation in MOOCs as a reinforcement learning problem to offer a personalized and dynamic knowledge concept label list to users. To consider more auxiliary information of users, we construct a heterogeneous information network among users, courses, and concepts, and use a meta-path-based method which can automatically identify useful meta-paths and multi-hop connections to learn a new graph structure for learning effective node representations on a graph. Comprehensive experiments and analyses on a real-world dataset collected from XuetangX show that our proposed model outperforms some state-of-the-art methods.


2020 ◽  
Author(s):  
Marco Battaglini ◽  
Forrest Crawford ◽  
Eleonora Patacchini ◽  
Sida Peng

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