15N and 13C nuclear magnetic resonance of deoxydinucleotide monophosphates. II. Protonation of the homo dimers deoxycytidylyl-(3′,5′)-deoxycytidine, thymidylyl-(3′,5′)-thymidine, and deoxyadenylyl-(3′,5′)-deoxyadenosine in dimethyl sulfoxide

1990 ◽  
Vol 68 (11) ◽  
pp. 2033-2038 ◽  
Author(s):  
Giovanna Barbarella ◽  
Massimo Luigi Capobianco ◽  
Luisa Tondelli ◽  
Vitaliano Tugnoli

The preferential protonation sites of the homo dimers deoxycytidylyl-(3′,5′)-deoxycytidine, thymidylyl-(3′,5′)-thymidine, and deoxyadenylyl-(3′,5′)-deoxyadenosine were established by nitrogen-15 and carbon-13 NMR in dimethyl sulfoxide, in the presence of varying amounts of CF3COOH. The nitrogen-15 NMR data show that in d(CpC) the capability of the two N3 nitrogens to accept the proton is slightly different. In d(TpT) and d(ApA) the protonation of the phosphate group leads to significant variations of the chemical shift of the carbons adjacent to phosphorus. Keywords: deoxydinucleotides, protonation, 15N and 13C NMR.

1978 ◽  
Vol 56 (1) ◽  
pp. 56-61 ◽  
Author(s):  
R. T. LaLonde ◽  
C. F. Wong

The configuration of the sulfoxide oxygen in syn- and anti-thiobinupharidine sulfoxide was determined by employing the 13C nmr sulfoxidation increments of C-6. Establishment of the 13C nmr line assignments for C-6 included the study of the C-6 and C-6′ deuterated thiobinupharidine and the corresponding sulfoxides. Thermolysis of syn-thiobinupharidine sulfoxide in DMSO and subsequent reduction with sodium borodeuteride in methanol yielded thiobinupharidine, labelled with deuterium only at C-6, and thionuphlutine B, labelled with deuterium at both C-6 and C-6′. Treatment of the anti sulfoxide in xylene or DMSO resulted in no thiobinupharidine or thionuphlutine B. Similarly, syn-neothiobinupharidine sulfoxide gave neothiobinupharidine and a new thiaspirane, thionuphlutine C. These two compounds were not produced from anti-neothiobinupharidine sulfoxide heated in xylene.


1977 ◽  
Vol 55 (18) ◽  
pp. 3304-3311 ◽  
Author(s):  
Donald W. Hughes ◽  
Bala C. Nalliah ◽  
Herbert L. Holland ◽  
David B. MacLean

The natural abundance 13C nuclear magnetic resonance spectra of a number of spirobenzylisoquinoline alkaloids and related model compounds have been recorded. The carbon resonances of the alkaloids were assigned by comparison with the spectra of other isoquinoline alkaloids and with those of the model compounds. It has been shown that 13C nmr spectroscopy may be used to differentiate between diastereomers in this series.


1976 ◽  
Vol 54 (6) ◽  
pp. 917-925 ◽  
Author(s):  
J. B. Stothers ◽  
C. T. Tan

The 13C nmr spectra of 35 bicyclo[2.2.2]octane and -octene derivatives have been determined to extend our examinations of the effects of stereochemistry on the shieldings of closely neighboring carbons. This series includes a variety of methyl substituted bicyclooctanols and -octenols as well as the corresponding hydrocarbons and some bicyclooctanones. With the bicyclo[2.2.2]octane skeleton it is possible to examine an array of systems having substituents separated by three and four bonds in a variety of orientations. The interactions, termed γ and δ effects, respectively, produce distinctive shielding variations which are useful for stereochemical elucidations. Particularly interesting are the pronounced shifts observed for the carbons bearing closely neighboring substituents. Characteristically, for vicinal substituents, these carbons are shielded while for syn-axial δ interactions, these carbons are deshielded by as much as 8.6 ppm. The results are compared with the trends found in other sterically crowded Systems.


1972 ◽  
Vol 50 (12) ◽  
pp. 1956-1958 ◽  
Author(s):  
N. Gurudata

The 13C n.m.r. spectrum of acetoxime has been obtained in five representative solvents and the chemical shifts of the three carbon atoms measured. The solvent effects on the chemical shifts are found to reflect specific solute–solvent interactions. The effect of deuteration of the α-protons on the chemical shift of the oximino carbon is also discussed.


2005 ◽  
Vol 59 (3) ◽  
pp. 354-365 ◽  
Author(s):  
Ronald Callahan ◽  
Ron Prip ◽  
Navroz Shariff ◽  
Olga Sklyut ◽  
Robert Rothchild ◽  
...  

Phencyclone, 1, a potent Diels-Alder diene, reacts with a series of N-alkylmaleimides, 2, to form hindered adducts, 3. The 300 MHz 1H and 75 MHz 13C NMR studies of these adducts at ambient temperatures have demonstrated slow rotations on the nuclear magnetic resonance (NMR) timescales for the unsubstituted bridgehead phenyl groups, and have revealed substantial magnetic anisotropic shielding effects in the 1H spectra of the N-alkyl groups of the adducts. The selected N-alkyl groups for the target compounds emphasized smaller branched alkyls, including C3 (isopropyl, a); C4 (isobutyl, b; and t-butyl, c); C5 (n-pentyl, d; isopentyl [isoamyl], e; 1-ethylpropyl, f; t-amyl, g;) and a related C8 isomer (1,1,3,3-tetramethylbutyl [“t-octyl”], h). The straight-chain n-pentyl analog was included as a reference. This present work on the branched N-alkylmaleimide adducts appreciably extends our earlier compilation on the N-n-alkylmaleimide adducts. Key methods for proton assignments included “high-resolution” 1H–1H chemical shift correlation spectroscopy, COSY45. 13C NMR of the adducts, 3, verified the expected number of aryl carbons for slow exchange limit (SEL) spectra of the bridgehead phenyl groups. The synthetic routes involved reaction of the corresponding amines, 4, with maleic anhydride to give the N-alkylmaleamic acids, 5, which underwent cyclodehydration to form the maleimides, 2. Magnetic anisotropic shielding magnitudes for alkyl group protons in the adducts were calculated relative to corresponding proton chemical shifts in the maleimides. Geometry optimizations for the above adducts (and for the N-n-butylmaleimide adduct) were performed at the Hartree-Fock level with the 6–31G* basis set. The existence of different contributing conformers for the adducts is discussed with respect to their calculated energies and implications regarding experimentally observed anisotropic shielding magnitudes.


1976 ◽  
Vol 54 (10) ◽  
pp. 1660-1664 ◽  
Author(s):  
I. W. J. Still ◽  
N. Plavac ◽  
D. M. McKinnon ◽  
M. S. Chauhan

13C nmr data have been obtained for a series of 4-thiazoline-2-thiones. Substituent chemical shift (s.c.s.) effects for methyl and phenyl substitution have been collated and are discussed in comparison with s.c.s. effects in other heterocyclic systems. Some attempt has also been made to compare our data with those reported previously for the thiazoles and for some thiones in the isothiazole series.


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