Application of 15N-enrichment methodologies to estimate nitrogen fixation in Casuarinaequisetifolia

1994 ◽  
Vol 24 (2) ◽  
pp. 201-207 ◽  
Author(s):  
John A. Parrotta ◽  
Dwight D. Baker ◽  
Maurice Fried

The 15N-enrichment technique for estimating biological nitrogen fixation in Casuarinaequisetifolia J.R. & G. Forst. was evaluated under field conditions in single-species and mixed-species plantings (with a nonfixing reference species, Eucalyptus × robusta J.E. Smith) between ages 6 and 24 months in Puerto Rico. Trenched and untrenched quadrats within the plantations were labelled at 6-month intervals with 15N-enriched ammonium sulfate at a rate of 0.2 g 15N•m−2•year−1 (2.0 g N•m−2•year−1). Analyses of foliar and whole-tree (weighted average) N-isotope ratios, based on periodic nondestructive and whole tree harvests, were used to estimate the proportion of nitrogen derived from biological dinitrogen fixation (PNDFA) and total nitrogen derived from fixation (TNDFA) in Casuarina. These results were compared with those obtained using the nitrogen difference method. The 15N-enrichment technique yielded consistent estimates of biological nitrogen fixation in Casuarina when either foliar or whole-tree N-isotopic data were used to calculate PNDFA and TNDFA. Estimates of PNDFA in Casuarina were similar for trenched monoculture and mixed-species quadrats, and in trenched and untrenched quadrats where the reference species (Eucalyptus) was interplanted with the N-fixing species. However, the results indicate that eucalyptus grown in small, untrenched monoculture quadrats is an inappropriate reference for estimating PNDFA in Casuarina. During the first 2 years after plantation establishment, Casuarina obtained from 48 to 67% of its nitrogen from the atmosphere based on foliar and whole-tree sampling. This amounted to between 82 and 94 kg•ha−1•year−1 in the monoculture treatment and between 39 and 62 kg•ha−1•year−1 in the mixed stands with Eucalyptus. These results also were in close agreement with estimates made using an N-difference method.

1996 ◽  
Vol 26 (9) ◽  
pp. 1684-1691 ◽  
Author(s):  
John A. Parrotta ◽  
Dwight D. Baker ◽  
Maurice Fried

Biological dinitrogen fixation in Casuarinaequisetifolia J.R. & G. Forst. and Leucaenaleucocephala (Lam.) de Wit was evaluated using the 15N-enrichment technique under field conditions in single-species and mixed-species plantings (with a nonfixing reference species, Eucalyptus ×robusta J.E. Smith) between 1.0 and 3.5 years of age in Puerto Rico. Following periodic labelling of trenched and untrenched plantation quadrats with 15N-enriched ammonium sulfate, analyses of foliar and whole-tree (weighted average) N-isotopic ratios and total biomass N were used to estimate the proportion of nitrogen derived from biological dinitrogen fixation (PNDFA) and total nitrogen derived from fixation (TNDFA) in C. equisetifolia and L. leucocephala. The 15N-enrichment technique yielded accurate estimates of dinitrogen fixation in maturing stands of these two tree species provided the reference species (Eucalyptus) was grown in close proximity to the N-fixing species in trenched, mixed-species plots. Changes in the 15N/14N ratio of soil-available nitrogen in single-species plots of the N-fixing and reference were found to yield inaccurate estimates of dinitrogen fixation in the single-species plots of C. equisetifolia and L. leucocephala after 2 years of age. The results confirm earlier findings that foliar sampling is a useful nondestructive alternative to whole-tree biomass sampling for the 15N-enrichment protocol. Between 1.0 and 3.5 years after plantation establishment, PNDFA in C. equisetifolia remained relatively constant between 50 and 60%, while PNDFA in L. leucocephala declined from nearly 100% at 1 year to less than 40% at 3.5 years. The rate of dinitrogen fixation (kg•ha−1•year−1) did not decline as the stands matured. Cumulative dinitrogen fixation (TNDFA) estimates at 3.5 years were very similar between species: 73 in C. equisetifolia and 74 kg N•ha−1•year−1 in L. leucocephala.


2009 ◽  
Vol 46 (3) ◽  
pp. 227-235 ◽  
Author(s):  
Chang-Bing Yu ◽  
Yu-Ying Li ◽  
Chun-Jie Li ◽  
Jian-Hao Sun ◽  
X. H. He ◽  
...  

2021 ◽  
Vol 20 (1) ◽  
Author(s):  
Qin Li ◽  
Haowei Zhang ◽  
Liqun Zhang ◽  
Sanfeng Chen

Abstract Background Biological nitrogen fixation is catalyzed by Mo-, V- and Fe-nitrogenases that are encoded by nif, vnf and anf genes, respectively. NifB is the key protein in synthesis of the cofactors of all nitrogenases. Most diazotrophic Paenibacillus strains have only one nifB gene located in a compact nif gene cluster (nifBHDKENX(orf1)hesAnifV). But some Paenibacillus strains have multiple nifB genes and their functions are not known. Results A total of 138 nifB genes are found in the 116 diazotrophic Paenibacillus strains. Phylogeny analysis shows that these nifB genes fall into 4 classes: nifBI class including the genes (named as nifB1 genes) that are the first gene within the compact nif gene cluster, nifBII class including the genes (named as nifB2 genes) that are adjacent to anf or vnf genes, nifBIII class whose members are designated as nifB3 genes and nifBIV class whose members are named as nifB4 genes are scattered on genomes. Functional analysis by complementation of the ∆nifB mutant of P. polymyxa which has only one nifB gene has shown that both nifB1 and nifB2 are active in synthesis of Mo-nitrogenase, while nifB3 and nifB4 genes are not. Deletion analysis also has revealed that nifB1 of Paenibacillus sabinae T27 is involved in synthesis of Mo-nitrogenase, while nifB3 and nifB4 genes are not. Complementation of the P. polymyxa ∆nifBHDK mutant with the four reconstituted operons: nifB1anfHDGK, nifB2anfHDGK, nifB1vnfHDGK and nifB2vnfHDGK, has shown both that nifB1 and nifB2 were able to support synthesis of Fe- or V-nitrogenases. Transcriptional results obtained in the original Paenibacillus strains are consistent with the complementation results. Conclusions The multiple nifB genes of the diazotrophic Paenibacillus strains are divided into 4 classes. The nifB1 located in a compact nif gene cluster (nifBHDKENX(orf1)hesAnifV) and the nifB2 genes being adjacent to nif or anf or vnf genes are active in synthesis of Mo-, Fe and V-nitrogenases, but nifB3 and nifB4 are not. The reconstituted anf system comprising 8 genes (nifBanfHDGK and nifXhesAnifV) and vnf system comprising 10 genes (nifBvnfHDGKEN and nifXhesAnifV) support synthesis of Fe-nitrogenase and V-nitrogenase in Paenibacillus background, respectively.


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