Three-Dimensional Positioning of B Chromosomes in Fibroblast Nuclei of the Red Fox and the Chinese Raccoon Dog

2013 ◽  
Vol 139 (4) ◽  
pp. 243-249 ◽  
Author(s):  
B. Kociucka ◽  
J. Sosnowski ◽  
A. Kubiak ◽  
A. Nowak ◽  
P. Pawlak ◽  
...  
Keyword(s):  
Red Fox ◽  
Three Dimensional ◽  
B Chromosomes ◽  
Raccoon Dog

scholarly journals Sequencing of Supernumerary Chromosomes of Red Fox and Raccoon Dog Confirms a Non-Random Gene Acquisition by B Chromosomes

Genes ◽  
2018 ◽  
Vol 9 (8) ◽  
pp. 405 ◽  
Author(s):  
Alexey Makunin ◽  
Svetlana Romanenko ◽  
Violetta Beklemisheva ◽  
Polina Perelman ◽  
Anna Druzhkova ◽  
...  
Keyword(s):  
Cell Cycle ◽  
Red Fox ◽  
B Chromosome ◽  
Mendelian Inheritance ◽  
B Chromosomes ◽  
Nyctereutes Procyonoides ◽  
Segmental Duplications ◽  
Raccoon Dog ◽  
Gene Acquisition ◽  
Genomic Regions

B chromosomes (Bs) represent a variable addition to the main karyotype in some lineages of animals and plants. Bs accumulate through non-Mendelian inheritance and become widespread in populations. Despite the presence of multiple genes, most Bs lack specific phenotypic effects, although their influence on host genome epigenetic status and gene expression are recorded. Previously, using sequencing of isolated Bs of ruminants and rodents, we demonstrated that Bs originate as segmental duplications of specific genomic regions, and subsequently experience pseudogenization and repeat accumulation. Here, we used a similar approach to characterize Bs of the red fox (Vulpes vulpes L.) and the Chinese raccoon dog (Nyctereutes procyonoides procyonoides Gray). We confirm the previous findings of the KIT gene on Bs of both species, but demostrate an independent origin of Bs in these species, with two reused regions. Comparison of gene ensembles in Bs of canids, ruminants, and rodents once again indicates enrichment with cell-cycle genes, development-related genes, and genes functioning in the neuron synapse. The presence of B-chromosomal copies of genes involved in cell-cycle regulation and tissue differentiation may indicate importance of these genes for B chromosome establishment.

scholarly journals New Data on Organization and Spatial Localization of B-Chromosomes in Cell Nuclei of the Yellow-Necked Mouse Apodemus flavicollis

Cells ◽  
2021 ◽  
Vol 10 (7) ◽  
pp. 1819
Author(s):  
Tatyana Karamysheva ◽  
Svetlana Romanenko ◽  
Alexey Makunin ◽  
Marija Rajičić ◽  
Alexey Bogdanov ◽  
...  
Keyword(s):  
In Situ Hybridization ◽  
Sex Chromosomes ◽  
Interphase Nucleus ◽  
Spatial Organization ◽  
Three Dimensional ◽  
Dna Probes ◽  
B Chromosomes ◽  
Apodemus Flavicollis ◽  
Yellow Necked Mouse

The gene composition, function and evolution of B-chromosomes (Bs) have been actively discussed in recent years. However, the additional genomic elements are still enigmatic. One of Bs mysteries is their spatial organization in the interphase nucleus. It is known that heterochromatic compartments are not randomly localized in a nucleus. The purpose of this work was to study the organization and three-dimensional spatial arrangement of Bs in the interphase nucleus. Using microdissection of Bs and autosome centromeric heterochromatic regions of the yellow-necked mouse (Apodemus flavicollis) we obtained DNA probes for further two-dimensional (2D)- and three-dimensional (3D)- fluorescence in situ hybridization (FISH) studies. Simultaneous in situ hybridization of obtained here B-specific DNA probes and autosomal C-positive pericentromeric region-specific probes further corroborated the previously stated hypothesis about the pseudoautosomal origin of the additional chromosomes of this species. Analysis of the spatial organization of the Bs demonstrated the peripheral location of B-specific chromatin within the interphase nucleus and feasible contact with the nuclear envelope (similarly to pericentromeric regions of autosomes and sex chromosomes). It is assumed that such interaction is essential for the regulation of nuclear architecture. It also points out that Bs may follow the same mechanism as sex chromosomes to avoid a meiotic checkpoint.

scholarly journals Garbage in the diet of carnivores in an agricultural area

2016 ◽  
Vol 2 (1) ◽  
pp. 81-86 ◽  
Author(s):  
Łukasz Jankowiak ◽  
Anna W. Malecha ◽  
Agata J. Krawczyk
Keyword(s):  
Urban Areas ◽  
Red Fox ◽  
American Mink ◽  
Natural Food ◽  
Nyctereutes Procyonoides ◽  
Raccoon Dog ◽  
Eurasian Otter ◽  
Spatial Changes ◽  
Mammalian Predators ◽  
Agricultural Areas

AbstractHuman food waste is considered to be richer in carbohydrates, lipids and proteins than most natural food supplies; however, it is very well digested in scats. So, as an indication of this kind of food in the diet, we have used each indigestible, anthropogenic origin element found in faeces (e.g., glass, plastic, rubber, etc.). There are few studies discussing the importance of garbage in the diet of mammalian predators living in farmland; definitely, most focus on this issue in urban areas. We studied the contribution of garbage in the diet of raccoon dog (Nyctereutes procyonoides), red fox (Vulpes vulpes), marten (Martessp.), polecat (Mustela putorius), stoat (Mustela erminea), American mink (Neovison vison) and Eurasian otter (Lutra lutra) in the agricultural areas of western Poland in 2006-2010. In addition, we examined the spatial changes in the diet of red fox and polecat. The largest contribution of garbage was found in scats of raccoon dog (8.8%), red fox (4.8%) and marten (4.3%). The diet of polecat, stoat and Eurasian otter contained 2.5%, 1.7% and 0.2% garbage items respectively. The most frequent item was plastic. Our analysis showed that garbage consumption by red fox and polecat was greater closer to human settlements. The results reveal a continuous gradient in the garbage consumption that corresponds with the degree of synanthropization of particular species.

Summer food composition and food niche overlap of the raccoon dog, red fox and badger in Finland

Ecography ◽  
1998 ◽  
Vol 21 (5) ◽  
pp. 457-463 ◽  
Author(s):  
Kaarina Kauhala ◽  
Paula Laukkanen ◽  
Inez Rége
Keyword(s):  
Red Fox ◽  
Niche Overlap ◽  
Food Composition ◽  
Raccoon Dog ◽  
Food Niche

scholarly journals Molecular detection of Anaplasma phagocytophilum in wild carnivores in north-eastern Poland

2019 ◽  
Vol 12 (1) ◽  
Author(s):  
Tomasz Szewczyk ◽  
Joanna Werszko ◽  
Anna W. Myczka ◽  
Zdzisław Laskowski ◽  
Grzegorz Karbowiak
Keyword(s):  
Anaplasma Phagocytophilum ◽  
Red Fox ◽  
Animal Health ◽  
Molecular Methods ◽  
Nyctereutes Procyonoides ◽  
Raccoon Dog ◽  
Wild Carnivores ◽  
Blood Sucking ◽  
Wide Range ◽  
Raccoon Dogs

Abstract Background Anaplasma phagocytophilum is an obligate parasitic intracellular bacterium. It is the causative agent of granulocytic anaplasmosis, with effects on human and animal health. In Europe, the pathogen is mainly transmitted among a wide range of vertebrate hosts by blood-sucking arthropods. The aim of this study was to determine the presence of A. phagocytophilum in wild carnivores, viz raccoon dogs (Nyctereutes procyonoides), badgers (Meles meles), foxes (Vulpes vulpes), martens (Martes sp.) and European polecats (Mustela putorius), using molecular methods. Methods In the present study, 174 spleen samples were collected from adult, wild carnivores hunted in the years 2013–2016. A short fragment (383 bp) of the 16S ribosomal RNA gene partial sequence was used as a marker to identify A. phagocytophilum in spleen samples collected from carnivores using nested PCR. Results The prevalence of A. phagocytophilum in wild carnivores was 31.61% (55/174). Seven sequences of A. phagocytophilum were generated from two raccoon dogs, two badgers, one marten, one red fox and one European polecat. Six identical nucleotide sequences were obtained from one raccoon dog, two badgers, one marten, one red fox and one European polecat (A. phagocytophilum sequences 1: MH328205–MH328209, MH328211), and these were identical to many A. phagocytophilum sequences in the GenBank database (100% similarity). The second sequence (A. phagocytophilum sequence 2: MH328210) obtained from the raccoon dog shared 99.74% identity with A. phagocytophilum sequence 1. Conclusions To our knowledge, this is the first study to use molecular methods to determine the presence of A. phagocytophilum in wild carnivores, viz raccoon dog, badger, marten and European polecat, in Poland. The detected A. phagocytophilum sequences (1 and 2) were closely related with those of A. phagocytophilum occurring in a wide range of wild and domestic animals and vectors.

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