Molecular phylogeography of the Chinese lacertids of the genus Eremias (Lacertidae) based on 16S rRNA mitochondrial DNA sequences

2007 ◽  
Vol 28 (1) ◽  
pp. 33-41 ◽  
Author(s):  
Jin Yuanting ◽  
Yan Yongfeng ◽  
Liu Naifa ◽  
Wan Lixia ◽  
Sun Shihong
Keyword(s):  
Mitochondrial Dna ◽  
16S Rrna ◽  
Phylogenetic Tree ◽  
Central Asia ◽  
Dna Sequences ◽  
Phylogenetic Relationships ◽  
Sister Group ◽  
Eastern Asia ◽  
Monophyletic Clade ◽  
Western Asia

AbstractIn the present study, relationships among all Chinese species of lacertids in the genus Eremias, E. velox, E. grammica, E. vermiculata, E. przewalskii, E. multiocellata, E. arguta, E. brenchleyi, and E. argus, were assessed using 574 aligned base positions of 16S rRNA mitochondrial DNA sequences from 103 individuals collected from 28 populations. Three kinds of phylogenetic tree (MP, ME, and NJ) were reconstructed and were found to be concordant. All eight species well form a monophyletic group. The resulting genetic distance between E. przewalskii and E. multiocellata is surprisingly low, only 0.008. The result could be due to introgression of the mtDNA molecule. All Eastern-Asia lacertids except E. vermiculata grouped together and formed a monophyletic clade. E. vermiculata are closely related to E. arguta, a Central-Asia species. E. brenchleyi and E. argus formed a monophyletic clade as the sister group of E. multiocellata. The Central-Asia species (E. arguta, E. grammica and E. velox) originated from Central-Asia and Eastern-Asia species (the rest) from China. The phylogenetic relationships among E. grammica, E. velox, E. arguta-vermiculata, E. argus-brenchleyi, and E. multiocellata-przewalskii are unclear in the study, which needs more comprehensive taxonomic sampling from Western Asia and Europe, and additional genetic evidence to resolve it.

Rediscovery of Rhacophorus yaoshanensis and Theloderma kwangsiensis at their type localities after five decades

Zootaxa ◽  
2018 ◽  
Vol 4379 (4) ◽  
pp. 484 ◽  
Author(s):  
WEICAI CHEN ◽  
XIAOWEN LIAO ◽  
SHICHU ZHOU ◽  
YUNMING MO ◽  
YONG HUANG
Keyword(s):  
Mitochondrial Dna ◽  
16S Rrna ◽  
Phylogenetic Relationships ◽  
New Record ◽  
Nature Reserve ◽  
Guangxi Province ◽  
Preliminary Assessment ◽  
Phylogenetic Studies ◽  
Pairwise Divergence ◽  
High Support

Rhacophorus yaoshanensis Liu & Hu, 1962 and Theloderma kwangsiensis Liu & Hu, 1962 were described by Liu & Hu (1962) based on two specimens and one specimen, respectively, from the Dayaoshan Ranges, Guangxi, China. Since these two species were described, no additional specimens have been collected from their type localities, presenting an issue for phylogenetic studies of the genera. Five decades later, we have rediscovered R. yaoshanensis and T. kwangsiensis from their type localities. In this paper, we re-describe the two species and conduct a preliminary assessment of their phylogenetic relationships using two mitochondrial DNA genes (12S and 16S rRNA). The results indicate with high support that R. yaoshanensis is closely related to Rhacophorus pinglongensis. Theloderma kwangsiensis is nested within Theloderma corticale, with only 0.0–0.6% pairwise divergence, a level typical of intraspecific variation. Based on both molecular and morphological analyses, we further confirm that T. kwangsiensis is a synonym of T. corticale. Shiwandashan National Nature Reserve, Guangxi Province, China, is a new record for T. corticale. 

Phylogenetic relationships of living and recently extinct bandicoots based on nuclear and mitochondrial DNA sequences

2012 ◽  
Vol 62 (1) ◽  
pp. 97-108 ◽  
Author(s):  
M. Westerman ◽  
B.P. Kear ◽  
K. Aplin ◽  
R.W. Meredith ◽  
C. Emerling ◽  
...  
Keyword(s):  
Mitochondrial Dna ◽  
Dna Sequences ◽  
Phylogenetic Relationships

The phylogenetic relationships of Paramesotriton (Caudata: Salamandridae) based on partial mitochondrial DNA gene sequences

Zootaxa ◽  
2012 ◽  
Vol 3150 (1) ◽  
pp. 59
Author(s):  
XIAOMING GU ◽  
HUI WANG ◽  
RONGRONG CHEN ◽  
YINGZHOU TIAN ◽  
SONG LI
Keyword(s):  
Mitochondrial Dna ◽  
Bayesian Inference ◽  
Maximum Likelihood ◽  
16S Rdna ◽  
Phylogenetic Relationships ◽  
Maximum Parsimony ◽  
Mitochondrial Gene ◽  
Sister Group ◽  
Species Group ◽  
Close Phylogenetic Relationship

We examined phylogenetic relationships among newst of the genus Paramesotriton using partial mitochondrial gene se-quences, including the ND2-tRNATyr region (1415 bp) and the 12S rDNA-tRNAVal -16S rDNA region (1774 bp), from 42individuals of 10 recognized Paramesotriton species and outgroups by Bayesian inference (BI), Maximum likelihood(ML) and Maximum Parsimony (MP) methods. We found that, (1) Laotriton laoensis is the sister group of Paramesotri-ton, (2) the genus Paramesotriton is monophyletic, composed of either the P. caudopunctatus species group and the P.chinensis species group, or the subgenera Allomesotriton and Paramesotriton (3) P. longliensis and P. zhijinensis shouldbe placed in the P. caudopunctatus species group or subgenus Allomesotriton; (4) P. fuzhongensis is not a junior synonym of P. chinensis, and there is a close phylogenetic relationship between P. fuzhongensis and P. guangxiensis.

scholarly journals Phylogenetic Relationships of Australian Skinks of the Mabuya Group (Reptilia: Scincidae) Inferred from Mitochondrial DNA Sequences.

1999 ◽  
Vol 74 (4) ◽  
pp. 135-139 ◽  
Author(s):  
Masanao Honda ◽  
Hidetoshi Ota ◽  
Mari Kobayashi ◽  
Tsutomu Hikida
Keyword(s):  
Mitochondrial Dna ◽  
Dna Sequences ◽  
Phylogenetic Relationships
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