Supersensitive In Situ Hybridization byTyramide Signal Amplification and Nanogold® Silver Staining: The Contribution of Autometallography and Catalyzed Reporter Deposition to the Rejuvenation of In Situ Hybridization

2002 ◽  
pp. 145-162
1995 ◽  
Vol 43 (4) ◽  
pp. 347-352 ◽  
Author(s):  
H M Kerstens ◽  
P J Poddighe ◽  
A G Hanselaar

For amplification of in situ hybridization (ISH) signals, we describe a method using catalyzed reporter deposition (CARD). This amplification method is based on the deposition of biotinylated tyramine (BT) at the location of the DNA probe. The BT precipitate can then visualized with fluorochrome- or enzyme-labeled avidin. Both for bright-field ISH (BRISH) and for fluorescence ISH (FISH), the detection limit was highly increased. This method is especially suitable for visualization of very weak ISH signals, such as those obtained by ISH using locus-specific DNA probes. Furthermore, CARD amplification of ISH signals (CARD-ISH) is highly sensitive, rapid, flexible, and easy to implement. Successful application of CARD-ISH with locus-specific DNA probes on histological and cytological samples may improve the determination of structural chromosomal aberrations in archival material.


2008 ◽  
Vol 73 (2) ◽  
pp. 142-147 ◽  
Author(s):  
J.A. Dijk ◽  
P. Breugelmans ◽  
J. Philips ◽  
P.J. Haest ◽  
E. Smolders ◽  
...  

1998 ◽  
Vol 111 (10) ◽  
pp. 1433-1439
Author(s):  
F. Zurita ◽  
R. Jimenez ◽  
M. Burgos ◽  
R.D. de la Guardia

We have developed a procedure for sequential silver staining and in situ hybridization to analyze the relationship between the amount of rDNA present in nucleolar organizer regions, as estimated by in situ hybridization, and their level of expression, as estimated by the silver signal. For simplicity we used cells from the insectivorous mole Talpa occidentalis, which have a single pair of nucleolar organizer regions in chromosome pair 3. The relative content of ribosomal cistrons was also related to the hierarchy of activation of the nucleolar organizer regions present in this chromosomal pair. Statistical analyses demonstrated that both the relative level of expression and the activation hierarchy depended mainly on the number of ribosomal cistrons in nucleolar organizer regions. We propose a functional two-step hypothesis, which is consistent with most known data concerning interchromosomal, intercellular and interindividual variation in a number of plant and animal species, including Talpa occidentalis. In step one, the first available transcription factors bind randomly to the ribosomal promoters, such that larger nucleolar organizer regions are more likely to recruit them. In the second step the remaining transcription factors are recruited in a cooperative way, thus completing activation of one nucleolar organizer region, before the next one becomes active.


1997 ◽  
Vol 3 (S2) ◽  
pp. 203-204
Author(s):  
Mariette van de Corput ◽  
Rob van Gijlswijk ◽  
Mark Bobrow ◽  
Tom Erickson ◽  
Roel Dirks ◽  
...  

In recent years, Tyramide Signal Amplification (TSA) has gained acclaim as a very sensitive detection method for immunocytochemsitry and fluorescence in situ hybridization (FISH). To maximally exploit the great signal generation capacity of TSA in mRNA-FISH, minimizing signals emanating from non-specifically bound nucleic acid probe becomes of prime importance, because a specificity check of the signals observed in the cytoplasm is virtually impossible. We reasoned that utilization of synthetic oligonucleotides (ONTs) in stead of commonly used cDNAs or cRNAs would diminish non-specific probe binding and that direct Horse Radish Peroxidase (HRP) labelling of ONTs and TSA would enable their in situ detection.This approach was first tested in metaphase DNA-FISH using chromosome-specific repeats as targets. Using bifunctional crosslinking chemistry and HPLC, 5’-hexylamino oligonucleotides for chromosome specific simple satellite and alphoid sequences were conjugated to HRP and purified. Following 15 - 20 min of situ hybridization of a single HRP-ONT probe to metaphase chromosomes and a direct flurochrome-tyramide detection step, such repeat targets could be visualized with high specificity and excellent signal-to noise ratio.


Genome ◽  
1992 ◽  
Vol 35 (6) ◽  
pp. 1032-1036 ◽  
Author(s):  
Ib Linde-Laursen ◽  
Elly Ibsen ◽  
Roland Von Bothmer ◽  
Henriette Giese

Two populations of the diploid and 10 populations of the tetraploid cytotype of Hordeum marinum ssp. gussoneanum were studied for the presence of chromosomal segments harbouring rDNA. Conventional cytological methods established the presence of only one satellited (SAT) chromosome pair in both cytotypes. This was supported by silver staining revealing two NORs and two standard-sized nucleoli. Two additional micronucleoli were observed in a few interphases of two tetraploid populations indicating the presence of an extra chromosome pair with very low nucleolus-forming activity. In situ hybridization with the wheat rDNA probe pTA71 identified intense signals at the nucleolar constrictions of the SAT chromosomes of both cytotypes and weaker signals in a chromosome pair of the tetraploid cytotype, morphologically similar to the SAT chromosomes but without visible nucleolar constrictions. This confirms the presence of rDNA in two chromosome pairs in the tetraploid cytotype. The morphological similarity between these two pairs and the SAT-chromosome pair of the diploid cytotype as well as an identical position of the signals in all three pairs give additional support to an autoploid origin of the tetraploid cytotype. The rDNA at the nucleolar constrictions consisted of two segments of condensed rDNA of different sizes connected by diffuse rDNA. The rDNA of the chromosome pair without nucleolar constrictions was condensed supporting that this conformation is connected with inactivity. The tripartite structure of the rDNA at the nucleolar constrictions corresponds to similar tripartite structures observed after silver staining and Giemsa C-banding.Key words: in situ hybridization, rDNA location, Hordeum marinum, autoploidy, inactive NORs.


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