scholarly journals Characterization of the complete mitogenome of Anopheles aquasalis, and phylogenetic divergences among Anopheles from diverse geographic zones

PLoS ONE ◽  
2019 ◽  
Vol 14 (9) ◽  
pp. e0219523 ◽  
Author(s):  
Luis Martinez-Villegas ◽  
Juliana Assis-Geraldo ◽  
Leonardo B. Koerich ◽  
Travis C. Collier ◽  
Yoosook Lee ◽  
...  
Gene Reports ◽  
2019 ◽  
Vol 17 ◽  
pp. 100499 ◽  
Author(s):  
Leonard Whye Kit Lim ◽  
Jill Sela Roja ◽  
Cynthia Keranti Anak Kamar ◽  
Hung Hui Chung ◽  
Yunshi Liao ◽  
...  

2020 ◽  
Vol 5 (3) ◽  
pp. 2665-2667
Author(s):  
Lichun Jiang ◽  
Xia Zhu ◽  
Jing He ◽  
Ximin Fu ◽  
Xiwen Chen ◽  
...  

2020 ◽  
Vol 99 (1) ◽  
Author(s):  
Hung Hui Chung ◽  
Cynthia Keranti Anak Kamar ◽  
Leonard Whye Kit Lim ◽  
Jill Sela Roja ◽  
Yunshi Liao ◽  
...  

2021 ◽  
Vol 6 (7) ◽  
pp. 2069-2070
Author(s):  
Mo Wang ◽  
Xiangrong Tong ◽  
Yuan Su ◽  
Fanming Meng ◽  
Zichao Liu
Keyword(s):  

2017 ◽  
Vol 10 (4) ◽  
pp. 805-808 ◽  
Author(s):  
Qishuo Wang ◽  
Ruijuan Feng ◽  
Lin Li ◽  
Cheng Wang ◽  
Chuankun Zhu

2021 ◽  
Vol 12 ◽  
Author(s):  
Bruna Trevisan ◽  
Denis Jacob Machado ◽  
Daniel J. G. Lahr ◽  
Fernando P. L. Marques

The recognized potential of using mitogenomics in phylogenetics and the more accessible use of high-throughput sequencing (HTS) offer an opportunity to investigate groups of neglected organisms. Here, we leveraged HTS to execute the most comprehensive documentation of mitogenomes for cestodes based on the number of terminals sequenced. We adopted modern approaches to obtain the complete mitogenome sequences of 86 specimens representing five orders of cestodes (three reported for the first time: Phyllobothriidea, “Tetraphyllidea” and Trypanorhyncha). These complete mitogenomes represent an increase of 41% of the mitogenomes available for cestodes (61–147) and an addition of 33% in the representativeness of the cestode orders. The complete mitochondrial genomes are conserved, circular, encoded in the same strand, and transcribed in the same direction, following the pattern observed previously for tapeworms. Their length varies from 13,369 to 13,795 bp, containing 36 genes in total. Except for the Trypanorhyncha specimen, the gene order of the other four cestode orders sequenced here suggests that it could be a synapomorphy for the acetabulate group (with a reversion for taenids). Our results also suggest that no single gene can tell all the evolutionary history contained in the mitogenome. Therefore, cestodes phylogenies based on a single mitochondrial marker may fail to capture their evolutionary history. We predict that such phylogenies would be improved if conducted under a total evidence framework. The characterization of the new mitochondrial genomes is the first step to provide a valuable resource for future studies on the evolutionary relationships of these groups of parasites.


2020 ◽  
Vol 5 (2) ◽  
pp. 1191-1193
Author(s):  
Yunjian Liu ◽  
Lu Wang ◽  
Lidan Wang ◽  
Linhua Deng ◽  
Ming Wei ◽  
...  

Insects ◽  
2021 ◽  
Vol 12 (7) ◽  
pp. 570
Author(s):  
Xueying Ge ◽  
Lilan Yuan ◽  
Ya Kang ◽  
Tong Liu ◽  
Haoyu Liu ◽  
...  

Complete mitochondrial genomes are valuable resources for phylogenetics in insects. The Cyphonoceridae represents an important lineage of fireflies. However, no complete mitogenome is available until now. Here, the first complete mitochondrial genome from this subfamily was reported, with Cyphonocerus sanguineus klapperichi as a representative. The mitogenome of C. sanguineus klapperichi was conserved in the structure and comparable to that of others in size and A+T content. Nucleotide composition was A+T-biased, and all genes exhibited a positive AT-skew and negative GC-skew. Two types of tandem repeat sequence units were present in the control region (136 bp × 2; 171 bp × 2 + 9 bp). For reconstruction of Lampyridae’s phylogeny, three different datasets were analyzed by both maximum likelihood (ML) and Bayesian inference (BI) methods. As a result, the same topology was produced by both ML analysis of 13 protein-coding genes and 2rRNA and BI analysis of 37 genes. The results indicated that Lampyridae, Lampyrinae, Luciolinae (excluding Emeia) were monophyletic, but Ototretinae was paraphyletic, of which Stenocladius was recovered as the sister taxon to all others, while Drilaster was more closely related to Cyphonocerinae; Phturinae + Emeia were included in a monophyletic clade, which comprised sister groups with Lampyridae. Vesta was deeply rooted in the Luciolinae.


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