scholarly journals Latent Curve Analyses of Longitudinal Twin Data Using a Mixed-Effects Biometric Approach

2006 ◽  
Vol 9 (3) ◽  
pp. 343-359 ◽  
Author(s):  
John J. McArdle

AbstractIn a recent article McArdle and Prescott (2005) showed how simultaneous estimation of the bio-metric parameters can be easily programmed using current mixed-effects modeling programs (e.g., SAS PROC MIXED). This article extends these concepts to deal with mixed-effect modeling of longitudinal twin data. The biometric basis of a polynomial growth curve model was used by Vandenberg and Falkner (1965) and this general class of longitudinal models was represented in structural equation form as a latent curve model by McArdle (1986). The new mixed-effects modeling approach presented here makes it easy to analyze longitudinal growth-decline models with biometric components based on standard maximum likelihood estimation and standard indices of goodness-of-fit (i.e., χ2, df, εa). The validity of this approach is first checked by the creation of simulated longitudinal twin data followed by numerical analysis using different computer programs (i.e., Mplus, Mx, MIXED, NLMIXED). The practical utility of this approach is examined through the application of these techniques to real longitudinal data from the Swedish Adoption/Twin Study of Aging (Pedersen et al., 2002). This approach generally allows researchers to explore the genetic and nongenetic basis of the latent status and latent changes in longitudinal scores in the absence of measurement error. These results show the mixed-effects approach easily accounts for complex patterns of incomplete longitudinal or twin pair data. The results also show this approach easily allows a variety of complex latent basis curves, such as the use of age-at-testing instead of wave-of-testing. Natural extensions of this mixed-effects longitudinal approach include more intensive studies of the available data, the analysis of categorical longitudinal data, and mixtures of latent growth-survival/ frailty models.

FLORESTA ◽  
2019 ◽  
Vol 50 (1) ◽  
pp. 1123
Author(s):  
Izabel Passos Bonete ◽  
Julio Eduardo Arce ◽  
Afonso Figueiredo Filho ◽  
Fabiane Aparecida de Souza Retslaff ◽  
Luciano Rodrigo Lanssanova

The aim of this study was to compare the effectiveness of artificial neural networks (ANNs) and mixed-effects models (MEMs) in describing the stem profile of Pinus taeda L., using sample data from 246 trees. First, three taper functions of different classes were adjusted: non-segmented, segmented, and variable-form. To adjust the models, the nonlinear regression technique (nls) was used. In the best performance equation for nls-adjusted diameter estimates, the nonlinear MEM (nlme) was applied at two levels, using the age class (ci) and DBH class (cd). For this, three different study scenarios were considered, with the number of coefficients with random effects ranging from one to three in each scenario. The adjustments were made using the nls and nlme functions in R software. The selected mixed-effect equations were compared with ANNs generated in Neuro 4.0 software. The taper function models and ANNs were classified according to statistical criteria and graphical analysis of residues. The tapering equation of Bi (2000) presented better performance for diameter estimates than the non-segmented and segmented equations. Application of the nlme technique in the Bi (2000) equation increased the accuracy of the diameter estimates for Pinus taeda, in relation to the adjustment using the nls technique. In the comparison of ANNs with the variations of the Bi equation of mixed-effects, the networks performed better, indicated in the description of the P. taeda profile.


2021 ◽  
Author(s):  
D Bottino ◽  
G Hather ◽  
L Yuan ◽  
M Stoddard ◽  
L White ◽  
...  

Abstract The duration of natural immunity in response to SARS-CoV-2 is a matter of some debate in the literature at present. For example, in a recent publication characterizing SARS-CoV-2 immunity over time, the authors fit pooled longitudinal data, using fitted slopes to infer the duration of SARS-CoV-2 immunity. In fact, such approaches can lead to misleading conclusions as a result of statistical model-fitting artifacts. To exemplify this phenomenon, we reanalyzed one of the markers (pseudovirus neutralizing titer) in the publication, using mixed-effects modeling, a methodology better suited to longitudinal datasets like these. Our findings showed that the half-life was both longer and more variable than reported by the authors. The example selected by us here illustrates the utility of mixed-effects modeling in provide more accurate estimates of the duration and heterogeneity of half-lives of molecular and cellular biomarkers of SARS-CoV-2 immunity.


2021 ◽  
pp. 096228022110463
Author(s):  
Thalita B Mattos ◽  
Larissa Avila Matos ◽  
Victor H Lachos

In longitudinal studies involving laboratory-based outcomes, repeated measurements can be censored due to assay detection limits. Linear mixed-effects (LMEs) models are a powerful tool to model the relationship between a response variable and covariates in longitudinal studies. However, the linear parametric form of linear mixed-effect models is often too restrictive to characterize the complex relationship between a response variable and covariates. More general and robust modeling tools, such as nonparametric and semiparametric regression models, have become increasingly popular in the last decade. In this article, we use semiparametric mixed models to analyze censored longitudinal data with irregularly observed repeated measures. The proposed model extends the censored linear mixed-effect model and provides more flexible modeling schemes by allowing the time effect to vary nonparametrically over time. We develop an Expectation-Maximization (EM) algorithm for maximum penalized likelihood estimation of model parameters and the nonparametric component. Further, as a byproduct of the EM algorithm, the smoothing parameter is estimated using a modified linear mixed-effects model, which is faster than alternative methods such as the restricted maximum likelihood approach. Finally, the performance of the proposed approaches is evaluated through extensive simulation studies as well as applications to data sets from acquired immune deficiency syndrome studies.


2020 ◽  
Vol 19 (4) ◽  
pp. 388-398
Author(s):  
Min Yuan ◽  
Yi Li ◽  
Yaning Yang ◽  
Jinfeng Xu ◽  
Fangbiao Tao ◽  
...  

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