scholarly journals Molecular Population Genetics of Accessory Gland Protein Genes and Testis-Expressed Genes inDrosophila mojavensisandD. arizonae

Genetics ◽  
2005 ◽  
Vol 171 (3) ◽  
pp. 1083-1101 ◽  
Author(s):  
Bradley J. Wagstaff ◽  
David J. Begun
Genetics ◽  
2000 ◽  
Vol 156 (4) ◽  
pp. 1879-1888 ◽  
Author(s):  
David J Begun ◽  
Penn Whitley ◽  
Bridget L Todd ◽  
Heidi M Waldrip-Dail ◽  
Andrew G Clark

Abstract Drosophila seminal proteins have an unusually high rate of molecular sequence evolution, suggesting either a high rate of neutral substitution or rapid adaptive evolution. To further quantify patterns of polymorphism and divergence in genes encoding seminal proteins, also called accessory gland proteins (Acp’s), we conducted a sequencing survey of 10 Acp genes in samples of Drosophila melanogaster and D. simulans (Acp29AB, Acp32CD, Acp33A, Acp36DE, Acp53Ea, Acp62F, Acp63F, Acp76A, Acp95EF, and Acp98AB). Mean heterozygosity at replacement sites in D. simulans was 0.0074 for Acp genes and 0.0013 for a set of 19 non-Acp genes, and mean melanogaster-simulans divergence at replacement sites was 0.0497 for Acp genes and 0.0107 at non-Acp genes. The elevated divergence of Acp genes is thus accompanied by elevated within-species polymorphism. In addition to the already-reported departures of Acp26A, Acp29AB, and Acp70A from neutrality, our data reject neutrality at Acp29AB and Acp36DE in the direction of excess replacements in interspecific comparisons.


Author(s):  
Daniel L. Hartl

A Primer of Population Genetics and Genomics, 4th edition, has been completely revised and updated to provide a concise but comprehensive introduction to the basic concepts of population genetics and genomics. Recent textbooks have tended to focus on such specialized topics as the coalescent, molecular evolution, human population genetics, or genomics. This primer bucks that trend by encouraging a broader familiarity with, and understanding of, population genetics and genomics as a whole. The overview ranges from mating systems through the causes of evolution, molecular population genetics, and the genomics of complex traits. Interwoven are discussions of ancient DNA, gene drive, landscape genetics, identifying risk factors for complex diseases, the genomics of adaptation and speciation, and other active areas of research. The principles are illuminated by numerous examples from a wide variety of animals, plants, microbes, and human populations. The approach also emphasizes learning by doing, which in this case means solving numerical or conceptual problems. The rationale behind this is that the use of concepts in problem-solving lead to deeper understanding and longer knowledge retention. This accessible, introductory textbook is aimed principally at students of various levels and abilities (from senior undergraduate to postgraduate) as well as practising scientists in the fields of population genetics, ecology, evolutionary biology, computational biology, bioinformatics, biostatistics, physics, and mathematics.


2013 ◽  
Vol 14 (5) ◽  
pp. 316-323 ◽  
Author(s):  
Beatriz García ◽  
Alicia R. Pérez Rosas ◽  
María Blariza ◽  
Carla Grosso ◽  
Cintia Fernández ◽  
...  

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