scholarly journals Genetic Diversity Assessment of Lines and Varieties in Winter Rapeseed (Brassica napus L.) using RAPD and SSR Molecular Markers

2016 ◽  
Vol 8 (17) ◽  
pp. 139-131 ◽  
Author(s):  
حسن هدایتی مرزونی ◽  
حبیب اله سمیع زاده لاهیجی ◽  
◽  
2014 ◽  
Vol 50 (No. 3) ◽  
pp. 216-225 ◽  
Author(s):  
L. Havlíčková ◽  
E. Jozová ◽  
A. Rychlá ◽  
M. Klíma ◽  
V. Kučera ◽  
...  

The genetic diversity of 94 accessions of winter oilseed rape (Brassica napus L.), representing past and contemporary material utilized in the Czech breeding programmes, was determined using microsatellites (SSRs), ISSRs and AFLPs. All three kinds of markers differed in the range of observed polymorphism and differentiated clearly each accession. Altogether 89 SSR, 1003 AFLP and 53 ISSR markers were evaluated. Their average rates of polymorphic bands were 100%, 53.9% and 90.6%, respectively, indicating high genetic diversity among the accessions. The greatest genetic distance was found by ISSRs (62.3%) whereas significantly lower distances of 49.4% in SSRs and 35.5% in AFLPs were observed. The genetic similarity matrix clearly distinguished all accessions. A set of the most distinct varieties was established. The analysis of the genetic pattern of the accessions indicated two groups comprising most of the modern Czech breeding materials, revealing a distinct shift in breeding. Surprisingly, molecular analyses did not support  breeders’ views about a narrow genetic base of the Czech breeding materials. The choice of appropriate technology for different aspects of germplasm evaluation is also discussed.


Crop Science ◽  
2010 ◽  
Vol 50 (4) ◽  
pp. 1236-1243 ◽  
Author(s):  
Berisso Kebede ◽  
Mohan Thiagarajah ◽  
Céline Zimmerli ◽  
M. Habibur Rahman

2012 ◽  
Vol 6 (2) ◽  
pp. 83-93 ◽  
Author(s):  
A.I. Fahmi ◽  
O.M. Assal ◽  
A.A. Nawar ◽  
A.A. El- Hosary ◽  
M.M. Mohammed

2005 ◽  
Vol 53 (4) ◽  
pp. 793-802 ◽  
Author(s):  
M. Hasan ◽  
F. Seyis ◽  
A. G. Badani ◽  
J. Pons-Kühnemann ◽  
W. Friedt ◽  
...  

2009 ◽  
Vol 120 (5) ◽  
pp. 921-931 ◽  
Author(s):  
Wolfgang Ecke ◽  
Rosemarie Clemens ◽  
Nora Honsdorf ◽  
Heiko C. Becker

2014 ◽  
Vol 37 (3) ◽  
pp. 556-559 ◽  
Author(s):  
Lenka Havlícková ◽  
Eva Jozová ◽  
Miroslav Klíma ◽  
Vratislav Kucera ◽  
Vladislav Curn

PLoS ONE ◽  
2020 ◽  
Vol 15 (1) ◽  
pp. e0227990
Author(s):  
Ruikun Chen ◽  
Ayako Shimono ◽  
Mitsuko Aono ◽  
Nobuyoshi Nakajima ◽  
Ryo Ohsawa ◽  
...  

2013 ◽  
Vol 5 (1) ◽  
pp. 114-119 ◽  
Author(s):  
Özlem ÖZBEK ◽  
Betül Uçar GIDIK

In cultivated commercial crop species, genetic diversity tends to decrease because of the extensive breeding processes. Therefore, germplasm of commercial crop species, such as Brassica napus L. should be evaluated and the genotypes, which have higher genetic diversity index, should be addressed as potential parental cross materials in breeding programs. In this study, the genetic diversity was analysed by using randomly amplified polymorphic DNA analysis (RAPD) technique in nine Turkish commercial rapeseed varieties. The RAPD primers (10-mer oligonucleotides) produced 51 scorable loci, 31 loci of which were polymorphic (60.78%) and 20 loci (39.22%) were monomorphic The RAPD bands were scored as binary matrix data and were analysed using POPGENE version 1.32. At locus level, the values of genetic diversity within population (Hs) and total (HT) were 0.15 and 0.19 respectively. The genetic differentiation (GST) and the gene flow (Nm) values between the populations were 0.20 and 2.05 respectively. The mean number of alleles (na), the mean number of effective alleles (nae), and the mean value of genetic diversity (He) were 2.00, 1.26, and 0.19 respectively. According to Pearson’s correlation, multiple regression and principal component analyses, eco-geographical conditions in combination had significant effect on genetic indices of commercial B. napus L. varieties were discussed.


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