Detection of T-cell receptor excision circles and κ-deleting recombination excision circles in the diagnosis of primary immunodeficiency: retrospective analysis of clinical cases

2019 ◽  
Vol 14 (6) ◽  
pp. 98-103
Author(s):  
L.Yu. Barycheva ◽  
◽  
L.S. Khachirova ◽  
L.T. L.T.Kubanova ◽  
O.V. Kalyuzhin ◽  
...  
2019 ◽  
Vol 40 (6) ◽  
pp. 465-469 ◽  
Author(s):  
Ashley L. Devonshire ◽  
Melanie Makhija

Primary immunodeficiency diseases are inherited defects of the innate or adaptive arms of the immune system that lead to an increase in the incidence, frequency, or severity of infections and/or immune dysregulation. There may be defects in the adaptive arm of the immune system, including combined immunodeficiencies and antibody deficiency syndromes, or abnormalities in innate immunity, such as defects of phagocytes, the complement pathway, or toll-like receptor mediated signaling. Recurrent sinopulmonary infections with encapsulated bacteria such as Haemophilus influenzae type B or Streptococcus pneumoniae may be characteristic of an antibody deficiency syndrome. Frequent viral, fungal, or protozoal infections may suggest T lymphocyte impairment. Multiple Staphylococcus skin infections and fungal infections may imply neutrophil dysfunction or the Hyper-IgE syndrome, and recurrent Neisseria infection is a characteristic manifestation of late complement component (C5‐9, or the membrane attack complex) defects. Recurrent viral or pyogenic bacterial infections, often without the presence of a significant inflammatory response, suggest a defect in toll-like receptor signaling. Mycobacterial infections are characteristic of defects in the interleukin (IL) 12/interferon γ pathway. Screening of newborns for T-cell lymphopenia by using polymerase chain reaction to amplify T-cell receptor excision circles, which are formed when a T cell rearranges the variable region of its receptor, serves as a surrogate for newly synthesized naive T cells. Because of very low numbers of T-cell receptor excision circles, severe combined immunodeficiency, 22q11.2 syndrome, and other causes of T-cell lymphopenia have been identified in newborns.


2019 ◽  
Vol 66 (1) ◽  
pp. 229-238 ◽  
Author(s):  
Tracie Profaizer ◽  
Patricia Slev

Abstract BACKGROUND T-cell receptor excision circles (TREC) and κ-deleting recombination receptor excision circles (KREC) concentrations can be used to assess and diagnose immune deficiencies, monitor thymic and bone marrow immune reconstitution, or follow responses to drug therapy. We developed an assay to quantify TREC, KREC, and a reference gene in a single reaction using droplet digital PCR (ddPCR). METHODS PCR was optimized for 3 targets: TREC, KREC, and ribonuclease P/MRP subunit p30 (RPP30) as the reference gene. Multiplexing was accomplished by varying the target's fluorophore and concentration. Correlation with clinical results was evaluated using 47 samples from healthy donors, 59 samples with T-cell and B-cell markers within the reference interval from the flow cytometry laboratory, 20 cord blood samples, and 34 samples submitted for exome sequencing for severe combined immunodeficiency disease (SCID). RESULTS The limit of the blank was 4 positive droplets, limit of detection 9 positive droplets, and limit of quantification 25 positive droplets, or 2.0 copies/μL. TREC and KREC copies/μL were as expected in the healthy donors and cord blood samples and concordant with the healthy flow cytometry results. Of the samples from the SCID Panel, 56.5% had a TREC count <20 copies/μL and 17.7% had a KREC count <20 copies/μL, suggestive of low T- and B-cell numbers, respectively. CONCLUSIONS Our multiplex ddPCR assay is an analytically sensitive and specific method for the absolute quantification of TREC and KREC. To the best of our knowledge, this paper is the first to describe the simultaneous quantification of TREC, KREC, and a reference gene by use of ddPCR.


2007 ◽  
pp. 197-214
Author(s):  
Marie-Lise Dion ◽  
Rafick-Pierre Sékaly ◽  
Rémi Cheynier

2005 ◽  
Vol 153-154 ◽  
pp. 111-115 ◽  
Author(s):  
Qing Lan ◽  
Luoping Zhang ◽  
Fran Hakim ◽  
Min Shen ◽  
Sarfraz Memon ◽  
...  

2015 ◽  
Vol 35 (2) ◽  
pp. 227-233 ◽  
Author(s):  
Jay P. Patel ◽  
Jennifer M. Puck ◽  
Rajgopal Srinivasan ◽  
Christina Brown ◽  
Uma Sunderam ◽  
...  

2003 ◽  
Vol 19 (6) ◽  
pp. 487-495 ◽  
Author(s):  
Savita Pahwa ◽  
Vivek Chitnis ◽  
Richard M. Mitchell ◽  
Sanjit Fernandez ◽  
Alamelu Chandrasekharan ◽  
...  

AIDS ◽  
2003 ◽  
Vol 17 (8) ◽  
pp. 1145-1149 ◽  
Author(s):  
Mireya Diaz ◽  
Daniel C Douek ◽  
Hernan Valdez ◽  
Brenna J Hill ◽  
Dolores Peterson ◽  
...  

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