1P010 Molecular Dynamics Simulation of Actin G-F Transformation(Proteins-structure and structure-function relationship,Oral Presentations)

Structure Function ◽

Dynamics Simulation ◽

Function Relationship ◽

2P010 Molecular dynamics simulation of the terminal oxygenase component of carbazole 1,9a-dioxygenase(Proteins-structure and structure-function relationship,Poster Presentations)

Seibutsu Butsuri ◽

10.2142/biophys.47.s115_3 ◽

2007 ◽

Vol 47 (supplement) ◽

pp. S115

Author(s):

Yu Inoue ◽

Tohru Terada ◽

Shugo Nakamura ◽

Kentaro Shimizu

Keyword(s):

Molecular Dynamics ◽

Structure Function ◽

Dynamics Simulation ◽

Function Relationship ◽

Poster Presentations

1P006 Molecular dynamics simulation of 3α-hydroxysteroid dehydrogenase with NADH : Structural changes in the substrate-binding loop(Proteins-structure and structure-function relationship,Oral Presentations)

Seibutsu Butsuri ◽

10.2142/biophys.47.s25_1 ◽

2007 ◽

Vol 47 (supplement) ◽

pp. S25

Author(s):

Shota Nakamura ◽

Tomotaka Oroguchi ◽

Tsutomu Yamane ◽

Mitsunori Ikeguchi ◽

Sachiyo Kataoka ◽

...

Keyword(s):

Molecular Dynamics ◽

Structure Function ◽

Structural Changes ◽

Substrate Binding ◽

Hydroxysteroid Dehydrogenase ◽

Dynamics Simulation ◽

Function Relationship ◽

Oral Presentations ◽

Binding Loop

2P062 Trajectory analysis of GFP mutant by Molecular Dynamics Simulation(Proteins-structure and structure-function relationship,Poster Presentations)

Seibutsu Butsuri ◽

10.2142/biophys.47.s128_3 ◽

2007 ◽

Vol 47 (supplement) ◽

pp. S128

Author(s):

Takayuki Kobayashi ◽

Tetsuya Kamioka ◽

Rie Akada ◽

Masahumi Yohda ◽

Yutaka Kuroda

Keyword(s):

Molecular Dynamics ◽

Structure Function ◽

Trajectory Analysis ◽

Dynamics Simulation ◽

Function Relationship ◽

Poster Presentations

2P056 Dynamics and hydration structure of Eco109I studied by small-angle X-ray scattering experiment and molecular dynamics simulation(Proteins-structure and structure-function relationship,Poster Presentations)

Seibutsu Butsuri ◽

10.2142/biophys.47.s127_1 ◽

2007 ◽

Vol 47 (supplement) ◽

pp. S127

Author(s):

Tomotaka Oroguchi ◽

Mamoru Sato ◽

Mitsunori Ikeguchi

Keyword(s):

Molecular Dynamics ◽

Structure Function ◽

Small Angle ◽

Dynamics Simulation ◽

X Ray ◽

X Ray Scattering ◽

Scattering Experiment ◽

Function Relationship ◽

Poster Presentations

1P590 Investigation of The Structure-Function Relationship of Importin-β by Molecular Dynamics Simulations(27. Molecular dynamics simulation,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s294_2 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S294

Author(s):

Yoshinori Hirano ◽

Noriaki Okimoto ◽

Atsushi Suenaga ◽

Makoto Taiji ◽

Naoko Imamoto ◽

...

Keyword(s):

Molecular Dynamics ◽

Structure Function ◽

Molecular Dynamics Simulations ◽

Poster Session ◽

Dynamics Simulation ◽

Meeting Program ◽

Function Relationship ◽

Dynamics Simulations ◽

Relationship Of

1P009 Molecular Dynamics Study on Ligand Induced Allosteric Transition in Myosin Motor Domain(Proteins-structure and structure-function relationship,Oral Presentations)

Seibutsu Butsuri ◽

10.2142/biophys.47.s25_4 ◽

2007 ◽

Vol 47 (supplement) ◽

pp. S25

Author(s):

Nobuhiro Umehara ◽

Mitsunori Takano

Keyword(s):

Molecular Dynamics ◽

Structure Function ◽

Motor Domain ◽

Myosin Motor ◽

Allosteric Transition ◽

Myosin Motor Domain ◽

Function Relationship ◽

1P011 Free-energy landscapes of humanin in water and in TFE/water using multicanonical molecular dynamics(Proteins-structure and structure-function relationship,Oral Presentations)

Seibutsu Butsuri ◽

10.2142/biophys.47.s26_2 ◽

2007 ◽

Vol 47 (supplement) ◽

pp. S26

Author(s):

Ryosuke Yagisawa ◽

Narutoshi Kamiya ◽

Akihiko Yamagishi ◽

Junichi Higo

Keyword(s):

Molecular Dynamics ◽

Free Energy ◽

Structure Function ◽

Energy Landscapes ◽

Free Energy Landscapes ◽

Function Relationship ◽

3P024 Model study of the desiccation-induced structural transformations of Group-3 Late Embryogenesis Abundant (G3LEA) proteins(Hemeproteins. Electronic states. Proteins-structure and structure-function relationship,Oral Presentations)

Seibutsu Butsuri ◽

10.2142/biophys.47.s209_1 ◽

2007 ◽

Vol 47 (supplement) ◽

pp. S209

Author(s):

Tempei Shimizu ◽

Shohei Miyama ◽

Takao Furuki ◽

Yasushi Kanamori ◽

Takahiro Kikawada ◽

...

Keyword(s):

Structure Function ◽

Electronic States ◽

Structural Transformations ◽

Late Embryogenesis Abundant ◽

Model Study ◽

Late Embryogenesis ◽

Group 3 ◽

Function Relationship ◽

1P003 Molecular dynamics simulations of the ligand-binding core of the inositol 1,4,5-trisphosphate receptor in the ligand-free slate(Proteins-structure and structure-function relationship,Oral Presentations)

Seibutsu Butsuri ◽

10.2142/biophys.47.s24_2 ◽

2007 ◽

Vol 47 (supplement) ◽

pp. S24

Author(s):

Yoichi Ida ◽

Sotaro Fuchigami ◽

Mitsunori Ikeguchi ◽

Akinori Kidera

Keyword(s):

Molecular Dynamics ◽

Ligand Binding ◽

Structure Function ◽

Ligand Free ◽

Inositol 1,4,5 Trisphosphate ◽

Binding Core ◽

Function Relationship ◽

Dynamics Simulations ◽

Trisphosphate Receptor ◽

Less explored plant lipases: Modeling and molecular dynamics simulations of plant lipases in different solvents and temperatures to understand structure-function relationship

International Journal of Biological Macromolecules ◽

10.1016/j.ijbiomac.2020.08.227 ◽

2020 ◽

Vol 164 ◽

pp. 3546-3558

Author(s):

Sreejanani Sankar ◽

Karthe Ponnuraj

Keyword(s):

Molecular Dynamics ◽

Structure Function ◽

Molecular Dynamics Simulations ◽

Function Relationship ◽

Dynamics Simulations