scholarly journals Membrane protein identification by hydrophobicity analysis

2001 ◽  
Author(s):  
Yuval Kluger
Keyword(s):  
Membrane Protein ◽  
Protein Identification ◽  
Hydrophobicity Analysis

scholarly journals Prediction of structural features and application to outer membrane protein identification

2015 ◽  
Vol 5 (1) ◽  
Author(s):  
Renxiang Yan ◽  
Xiaofeng Wang ◽  
Lanqing Huang ◽  
Feidi Yan ◽  
Xiaoyu Xue ◽  
...  
Keyword(s):  
Membrane Protein ◽  
Outer Membrane ◽  
Outer Membrane Protein ◽  
Protein Identification ◽  
Structural Features

Membrane Protein Identification via Multiple Kernel Fuzzy SVM

2021 ◽  
pp. 634-646
Author(s):  
Weizhong Lu ◽  
Jiawei Shen ◽  
Yuqing Qian ◽  
Hongjie Wu ◽  
Yijie Ding ◽  
...  
Keyword(s):  
Membrane Protein ◽  
Protein Identification ◽  
Multiple Kernel

Enhancing Membrane Protein Identification Using a Simplified Centrifugation and Detergent-Based Membrane Extraction Approach

2018 ◽  
Vol 90 (4) ◽  
pp. 2434-2439 ◽  
Author(s):  
Yanting Zhou ◽  
Jing Gao ◽  
Hongwen Zhu ◽  
Jingjing Xu ◽  
Han He ◽  
...  
Keyword(s):  
Membrane Protein ◽  
Protein Identification ◽  
Membrane Extraction

Binding of scatter factor to epithelial cell membrane protein: identification of its receptor

1992 ◽  
Vol 1105 (1) ◽  
pp. 141-147 ◽  
Author(s):  
Ansamma Joseph ◽  
Madhu Bhargava ◽  
Eliot Rosen ◽  
Itzhak D. Goldberg
Keyword(s):  
Epithelial Cell ◽  
Cell Membrane ◽  
Membrane Protein ◽  
Protein Identification ◽  
Scatter Factor ◽  
Cell Membrane Protein

scholarly journals Membrane Protein Identification in Rodent Brain Tissue Samples and Acute Brain Slices

Cells ◽  
2019 ◽  
Vol 8 (5) ◽  
pp. 423 ◽  
Author(s):  
Sarah Joost ◽  
Stefan Mikkat ◽  
Michael Wille ◽  
Antje Schümann ◽  
Oliver Schmitt
Keyword(s):  
Plasma Membrane ◽  
Membrane Proteins ◽  
Membrane Protein ◽  
Sample Size ◽  
Protein Identification ◽  
Disease Modeling ◽  
Brain Slices ◽  
Small Sample ◽  
Mass Spectrometric ◽  
Plasma Membrane Proteins

Acute brain slices are a sample format for electrophysiology, disease modeling, and organotypic cultures. Proteome analyses based on mass spectrometric measurements are seldom used on acute slices, although they offer high-content protein analyses and explorative approaches. In neuroscience, membrane proteins are of special interest for proteome-based analysis as they are necessary for metabolic, electrical, and signaling functions, including myelin maintenance and regeneration. A previously published protocol for the enrichment of plasma membrane proteins based on aqueous two-phase polymer systems followed by mass spectrometric protein identification was adjusted to the small sample size of single acute murine slices from newborn animals and the reproducibility of the results was analyzed. For this, plasma membrane proteins of 12 acute slice samples from six animals were enriched and analyzed by liquid chromatography-mass spectrometry. A total of 1161 proteins were identified, of which 369 were assigned to membranes. Protein abundances showed high reproducibility between samples. The plasma membrane protein separation protocol can be applied to single acute slices despite the low sample size and offers a high yield of identifiable proteins. This is not only the prerequisite for proteome analysis of organotypic slice cultures but also allows for the analysis of small-sized isolated brain regions at the proteome level.

Improvement of hydrophobic integral membrane protein identification by mild performic acid oxidation-assisted digestion

2010 ◽  
Vol 407 (2) ◽  
pp. 196-204 ◽  
Author(s):  
Rui Cao ◽  
Yisong Liu ◽  
Ping Chen ◽  
Rong Lv ◽  
Qin Song ◽  
...  
Keyword(s):  
Membrane Protein ◽  
Protein Identification ◽  
Integral Membrane Protein ◽  
Performic Acid ◽  
Acid Oxidation

Membrane Protein Identification: N-Terminal Labeling of Nontryptic Membrane Protein Peptides Facilitates Database Searching

2008 ◽  
Vol 7 (2) ◽  
pp. 659-665 ◽  
Author(s):  
Maria Jansson ◽  
Kristofer Wårell ◽  
Fredrik Levander ◽  
Peter James
Keyword(s):  
Membrane Protein ◽  
Protein Identification ◽  
Database Searching

scholarly journals Characterization of membrane protein interactomes by Co-interacting Protein Identification Technology (CoPIT)

2015 ◽  
Author(s):  
Sandra Pankow ◽  
Sandra Pankow ◽  
Casimir Bamberger ◽  
Diego Calzolari ◽  
Andreas Bamberger ◽  
...  
Keyword(s):  
Membrane Protein ◽  
Protein Identification ◽  
Interacting Protein

The synaptic vesicle proteome: A comparative study in membrane protein identification

PROTEOMICS ◽  
2004 ◽  
Vol 4 (10) ◽  
pp. 3141-3155 ◽  
Author(s):  
Holly D. Coughenour ◽  
Reggie S. Spaulding ◽  
Charles M. Thompson
Keyword(s):  
Membrane Protein ◽  
Comparative Study ◽  
Synaptic Vesicle ◽  
Protein Identification
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