scholarly journals Evaluation of the Sequence Variability within the PCR Primer/Probe Target Regions of the SARS-CoV-2 Genome

BIO-PROTOCOL ◽  
2020 ◽  
Vol 10 (24) ◽  
Author(s):  
Kashif Khan ◽  
Peter Cheung
2015 ◽  
Vol 214 ◽  
pp. 15-24 ◽  
Author(s):  
Young Ran Nam ◽  
Uk Lee ◽  
Han Seok Choi ◽  
Kyoung Jin Lee ◽  
Nari Kim ◽  
...  

Genetics ◽  
2007 ◽  
Vol 177 (2) ◽  
pp. 1071-1085 ◽  
Author(s):  
Jeffrey D. Jensen ◽  
Vanessa L. Bauer DuMont ◽  
Adeline B. Ashmore ◽  
Angela Gutierrez ◽  
Charles F. Aquadro

2011 ◽  
Vol 27 (24) ◽  
pp. 3432-3434 ◽  
Author(s):  
Y. Zhou ◽  
W. Qu ◽  
Y. Lu ◽  
Y. Zhang ◽  
X. Wang ◽  
...  

2010 ◽  
Vol 3 (7) ◽  
pp. 515-518 ◽  
Author(s):  
Subhasish Bandyopadhyay ◽  
Asit Kumar Bera ◽  
Sourav Sikdar ◽  
Sumanta De ◽  
Subhashree Ghosh ◽  
...  

2003 ◽  
Vol 69 (4) ◽  
pp. 2377-2382 ◽  
Author(s):  
Said El Fantroussi ◽  
Hidetoshi Urakawa ◽  
Anne E. Bernhard ◽  
John J. Kelly ◽  
Peter A. Noble ◽  
...  

ABSTRACT Oligonucleotide microarrays were used to profile directly extracted rRNA from environmental microbial populations without PCR amplification. In our initial inspection of two distinct estuarine study sites, the hybridization patterns were reproducible and varied between estuarine sediments of differing salinities. The determination of a thermal dissociation curve (i.e., melting profile) for each probe-target duplex provided information on hybridization specificity, which is essential for confirming adequate discrimination between target and nontarget sequences.


2009 ◽  
Vol 101 (6) ◽  
pp. 3235-3245 ◽  
Author(s):  
Cara M. Hampton ◽  
Jon T. Sakata ◽  
Michael S. Brainard

Behavioral variability is important for motor skill learning but continues to be present and actively regulated even in well-learned behaviors. In adult songbirds, two types of song variability can persist and are modulated by social context: variability in syllable structure and variability in syllable sequencing. The degree to which the control of both types of adult variability is shared or distinct remains unknown. The output of a basal ganglia-forebrain circuit, LMAN (the lateral magnocellular nucleus of the anterior nidopallium), has been implicated in song variability. For example, in adult zebra finches, neurons in LMAN actively control the variability of syllable structure. It is unclear, however, whether LMAN contributes to variability in adult syllable sequencing because sequence variability in adult zebra finch song is minimal. In contrast, Bengalese finches retain variability in both syllable structure and syllable sequencing into adulthood. We analyzed the effects of LMAN lesions on the variability of syllable structure and sequencing and on the social modulation of these forms of variability in adult Bengalese finches. We found that lesions of LMAN significantly reduced the variability of syllable structure but not of syllable sequencing. We also found that LMAN lesions eliminated the social modulation of the variability of syllable structure but did not detect significant effects on the modulation of sequence variability. These results show that LMAN contributes differentially to syllable versus sequence variability of adult song and suggest that these forms of variability are regulated by distinct neural pathways.


2011 ◽  
Vol 36 (2) ◽  
pp. 121-124 ◽  
Author(s):  
José Evando A. Beserra Jr. ◽  
Eduardo C. Andrade ◽  
Rosa F.R. Araújo Camarço ◽  
Aline K.Q. Nascimento ◽  
José Albérsio A. Lima

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