scholarly journals Community metabarcoding reveals the relative role of environmental filtering and dispersal in metacommunity dynamics of soil microarthropods across a mosaic of montane forests

Author(s):  
Victor Noguerales ◽  
Emmanouil Meramveliotakis ◽  
Adrián Castro-Insua ◽  
Carmelo Andujar ◽  
Paula Arribas ◽  
...  

Disentangling the relative role of environmental filtering and dispersal limitation in driving metacommunity structure across mountainous regions remains challenging, as the way we quantify spatial connectivity in topographically and environmentally heterogeneous landscapes can influence our perception of which process predominates. More empirical datasets are required to account for taxon- and context-dependency but relevant research is often compromised by coarse taxonomic resolution. We here employed haplotype-level community DNA metabarcoding, enabled by stringent filtering of Amplicon Sequence Variants (ASVs), to characterize metacommunity structure of soil microarthropod assemblages across a mosaic of five forest habitats on the Troodos mountain range in Cyprus. We found similar β diversity patterns at ASV and species (OTU, Operational Taxonomic Unit) levels, which pointed to a primary role of habitat filtering resulting in the existence of largely distinct metacommunities linked to different forest types. Within-habitat turnover was correlated to topoclimatic heterogeneity, again emphasizing the role of environmental filtering. However, when integrating landscape matrix information for the highly fragmented Golden Oak habitat, we also detected a major role of dispersal limitation imposed by patch connectivity, indicating that stochastic and niche-based processes synergistically govern community assembly. Alpha diversity patterns varied between ASV and OTU levels, with OTU richness decreasing with elevation and ASV richness following a longitudinal gradient, potentially reflecting a decline of genetic diversity eastwards due to historical pressures. Our study demonstrates the utility of haplotype-level community metabarcoding for characterising metacommunity structure of complex assemblages and improving our understanding of biodiversity dynamics across mountainous landscapes worldwide.

Author(s):  
Victor Noguerales ◽  
Emmanouil Meramveliotakis ◽  
Adrián Castro-Insua ◽  
Carmelo Andujar ◽  
Paula Arribas ◽  
...  

Disentangling the relative role of environmental filtering and dispersal limitation in driving metacommunity structure across mountainous regions remains challenging, as the way we quantify spatial connectivity in topographically and environmentally heterogeneous landscapes can influence our perception of which process predominates. More empirical datasets are required to account for taxon- and context-dependency but relevant research is often compromised by coarse taxonomic resolution. We here employed haplotype-level community DNA metabarcoding, enabled by stringent filtering of Amplicon Sequence Variants (ASVs), to characterize metacommunity structure of soil microarthropod assemblages across a mosaic of five forest habitats on the Troodos mountain range in Cyprus. We found similar β diversity patterns at ASV and species (OTU, Operational Taxonomic Unit) levels, which pointed to a primary role of habitat filtering resulting in the existence of largely distinct metacommunities linked to different forest types. Within-habitat turnover was correlated to topoclimatic heterogeneity, again emphasizing the role of environmental filtering. However, when integrating landscape matrix information for the highly fragmented Golden Oak habitat, we also detected a major role of dispersal limitation imposed by patch connectivity, indicating that stochastic and niche-based processes synergistically govern community assembly. Alpha diversity patterns varied between ASV and OTU levels, with OTU richness decreasing with elevation and ASV richness following a longitudinal gradient, potentially reflecting a decline of genetic diversity eastwards due to historical pressures. Our study demonstrates the utility of haplotype-level community metabarcoding for characterising metacommunity structure of complex assemblages and improving our understanding of biodiversity dynamics across mountainous landscapes worldwide.


2017 ◽  
Vol 284 (1859) ◽  
pp. 20170817 ◽  
Author(s):  
Shana K. Goffredi ◽  
Shannon Johnson ◽  
Verena Tunnicliffe ◽  
David Caress ◽  
David Clague ◽  
...  

Hydrothermal vent communities are distributed along mid-ocean spreading ridges as isolated patches. While distance is a key factor influencing connectivity among sites, habitat characteristics are also critical. The Pescadero Basin (PB) and Alarcón Rise (AR) vent fields, recently discovered in the southern Gulf of California, are bounded by previously known vent localities (e.g. Guaymas Basin and 21° N East Pacific Rise); yet, the newly discovered vents differ markedly in substrata and vent fluid attributes. Out of 116 macrofaunal species observed or collected, only three species are shared among all four vent fields, while 73 occur at only one locality. Foundation species at basalt-hosted sulfide chimneys on the AR differ from the functional equivalents inhabiting sediment-hosted carbonate chimneys in the PB, only 75 km away. The dominant species of symbiont-hosting tubeworms and clams, and peripheral suspension-feeding taxa, differ between the sites. Notably, the PB vents host a limited and specialized fauna in which 17 of 26 species are unknown at other regional vents and many are new species. Rare sightings and captured larvae of the ‘missing’ species revealed that dispersal limitation is not responsible for differences in community composition at the neighbouring vent localities. Instead, larval recruitment-limiting habitat suitability probably favours species differentially. As scenarios develop to design conservation strategies around mining of seafloor sulfide deposits, these results illustrate that models encompassing habitat characteristics are needed to predict metacommunity structure.


Author(s):  
Mathew A. Leibold ◽  
Javiera Rudolph ◽  
F. Guillaume Blanchet ◽  
Luc De Meester ◽  
Dominique Gravel ◽  
...  

ABSTRACTMetacommunity ecology has become an important subdiscipline of ecology, but it is increasingly evident that its foundational theoretical and analytical frameworks do not adequately incorporate a realistic continuum of environmental and biotic process at play. We propose an approach that develops stronger links between theoretical and statistical frameworks to shift the focus towards the study of the ‘internal structure’ of metacommunities by dissecting how different species and different sites contribute to overall metacommunity structure. To illustrate this, we simulate data from a model that includes environmental variation, dispersal, biotic interactions, and stochasticity as the basic ecological processes that influence species’ (co)-distributions. We analyze the simulated data with hierarchical community models and propose a new method to visualize and analyze the simultaneous role of species co-distribution, environment, space, and stochasticity in this emerging statistical approach. We focus in particular on quantifying how species affect the overall structure of the metacommunity via differences in their dispersal and niche traits, and how environmental filtering, dispersal and species interactions varies from site to site in relation to environmental conditions and connectivity. Although there are still challenges ahead, this framework provides a roadmap for a more comprehensive approach by jointly developing more mechanistic theory based on community assembly processes and the analytical tools needed to map these concepts onto data in diverse landscapes and systems.


Ecography ◽  
2011 ◽  
Vol 35 (12) ◽  
pp. 1124-1133 ◽  
Author(s):  
Zhiheng Wang ◽  
Jingyun Fang ◽  
Zhiyao Tang ◽  
Xin Lin

2021 ◽  
Author(s):  
Ángel Gálvez ◽  
Pedro R. Peres-Neto ◽  
Andreu Castillo-Escrivà ◽  
Fabián Bonilla ◽  
Antonio Camacho ◽  
...  

AbstractThe metacommunity concept provides a theoretical framework that aims at explaining organism distributions by a combination of environmental filtering, dispersal and drift. With the development of statistical tools to quantify and partially isolate the role of each of these processes, empirical metacommunity studies have multiplied worldwide. However, few works attempt a multi-taxon approach and even fewer compare two distant biogeographical regions using the same methodology. Under this framework, we tested the expectation that temperate (Mediterranean) pond metacommunities would be more influenced by environmental and spatial processes than tropical ones, because of stronger environmental gradients and higher isolation of waterbodies.We surveyed 30 tropical and 32 Mediterranean temporary ponds and obtained data on 49 environmental variables (including limnological, hydrogeomorphological, biotic, climatic, and landscape variables). We characterized the biological communities of Bacteria and Archaea (from the water column and the sediment), phytoplankton, zooplankton, benthic invertebrates, amphibians and birds, and estimated the relative role of space and environment on metacommunity organization for each group and region, by means of variation partitioning using Generalized Additive Models (GAMs).The residual (unexplained) variation was larger in tropical pond metacommunities, suggesting a higher role for stochastic processes and/or effects of unmeasured processes such as biotic interactions in the tropics. Environmental filtering was important in both tropical and Mediterranean ponds, but markedly stronger in the latter, probably related to higher environmental heterogeneity. The variability between taxonomic groups in spatial and environmental contributions was very wide, and only some similarities between geographic settings were observed for the environmental effects of passively dispersing organisms, with rotifers and diatoms being among the most and least affected by the abiotic environment, respectively, in both areas. Overall, these results provide support, in a wide variety of aquatic organisms, for the classical view of stronger abiotic niche constraints in temperate areas compared to the tropics.


2018 ◽  
Vol 5 (1) ◽  
pp. 93-115
Author(s):  
Miloš Stamenković

SummarySports photography undoubtedly has a significant place in sports press and publicism. It’s main and primary role is to present sports to the readers as art, which it is. Sport is characterized by dynamic and varied movements, and the main role of sports photography is reflected in the fact that it is in this way that sport shows its essence. Having in mind that photography tells more than a thousand words it sends a clear message to the reader as well to people who are informed about events via sports portals. Sports photography is a multidimensional art for many reasons. When we say “multi”, it primarily refers to a wider range that sports photography has to offer, which means sports photography is not only directed at presenting athletes on the move and the main actors who contribute to achieving the results by their engagement – it also has the role of sports “psychophotography” which is an analysis and capture of the emotional reaction of an athlete after winning or losing from the opposing team.


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