scholarly journals Design and Application of Signal Modeling, Segmentation and Classification Methods for High-Frequency Ultrasound Backscatter Signals

Author(s):  
Noushin R. Farnoud

In this study, we explore the possibility of monitoring program cell death (apoptosis) and classifying clusters of apoptotic cells based on the changes in high frequency ultrasound backscatter signals from these cells. One of the hallmarks of cancer is that the fail [sic] in the apoptosis mechanism in cells. Therefore this research carries the promise of designing more refined and more effective cancer therapies. The ultrasound signals are modeled through the Autoregressive (AR) modeling technique. The proper model order is calculated by tracking the error criteria derived from statistical properties of the original and modeled signal. In the next stage, five machine learning classifiers are developed to classify backscatter signals based on their AR coefficients. In clinical applications ultrasound backscatter signals from tissues and tumors are most likely to be non-stationary. Therefore analyzing such signals requires signal segmentation techniques. We developed recursive least square lattice filter for adaptive segmentation of ultrasound backscatter signals from multiple cell types into blocks of stationary segments, and model and classify the segments individually. In this thesis we demonstrate the accuracy of modeling, segmentation and classification techniques to detect signals from different cell pellets based on the signal processing and machine learning techniques.

2021 ◽  
Author(s):  
Noushin R. Farnoud

In this study, we explore the possibility of monitoring program cell death (apoptosis) and classifying clusters of apoptotic cells based on the changes in high frequency ultrasound backscatter signals from these cells. One of the hallmarks of cancer is that the fail [sic] in the apoptosis mechanism in cells. Therefore this research carries the promise of designing more refined and more effective cancer therapies. The ultrasound signals are modeled through the Autoregressive (AR) modeling technique. The proper model order is calculated by tracking the error criteria derived from statistical properties of the original and modeled signal. In the next stage, five machine learning classifiers are developed to classify backscatter signals based on their AR coefficients. In clinical applications ultrasound backscatter signals from tissues and tumors are most likely to be non-stationary. Therefore analyzing such signals requires signal segmentation techniques. We developed recursive least square lattice filter for adaptive segmentation of ultrasound backscatter signals from multiple cell types into blocks of stationary segments, and model and classify the segments individually. In this thesis we demonstrate the accuracy of modeling, segmentation and classification techniques to detect signals from different cell pellets based on the signal processing and machine learning techniques.


2014 ◽  
Vol 40 (1) ◽  
pp. 244-257 ◽  
Author(s):  
Nils Männicke ◽  
Martin Schöne ◽  
Matthias Gottwald ◽  
Felix Göbel ◽  
Michael L. Oelze ◽  
...  

2021 ◽  
Author(s):  
Michael C. Kolios ◽  
G. J. Czarnota ◽  
A. E. Worthington ◽  
A. Giles ◽  
A. S. Tunis ◽  
...  

Towards Understanding the Nature of High Frequency Ultrasound Backscatter from Cells and Tissues: an Investigation of Backscatter Power Spectra from Different Concentrations of Cells of Different Sizes


2016 ◽  
Vol 42 (6) ◽  
pp. 1375-1384 ◽  
Author(s):  
Nils Männicke ◽  
Martin Schöne ◽  
Jukka Liukkonen ◽  
Dominik Fachet ◽  
Satu Inkinen ◽  
...  

2002 ◽  
Vol 10 (7) ◽  
pp. 535-541 ◽  
Author(s):  
B. Pellaumail ◽  
A. Watrin ◽  
D. Loeuille ◽  
P. Netter ◽  
G. Berger ◽  
...  

2020 ◽  
Vol 142 (5) ◽  
Author(s):  
Yanhui Ma ◽  
Elias Pavlatos ◽  
Keyton Clayson ◽  
Sunny Kwok ◽  
Xueliang Pan ◽  
...  

Abstract Characterization of the biomechanical behavior of the optic nerve head (ONH) in response to intraocular pressure (IOP) elevation is important for understanding glaucoma susceptibility. In this study, we aimed to develop and validate a three-dimensional (3D) ultrasound elastographic technique to obtain mapping and visualization of the 3D distributive displacements and strains of the ONH and surrounding peripapillary tissue (PPT) during whole globe inflation from 15 to 30 mmHg. 3D scans of the posterior eye around the ONH were acquired through full tissue thickness with a high-frequency ultrasound system (50 MHz). A 3D cross-correlation-based speckle-tracking algorithm was used to compute tissue displacements at ∼30,000 kernels distributed within the region of interest (ROI), and the components of the strain tensors were calculated at each kernel by using least square estimation of the displacement gradients. The accuracy of displacement calculation was evaluated using simulated rigid-body translation on ultrasound radiofrequency (RF) data obtained from a porcine posterior eye. The accuracy of strain calculation was evaluated using finite element (FE) models. Three porcine eyes were tested showing that ONH deformation was heterogeneous with localized high strains. Substantial radial (i.e., through-thickness) compression was observed in the anterior ONH and out-of-plane (i.e., perpendicular to the surface of the shell) shear was shown to concentrate in the vicinity of ONH/PPT border. These preliminary results demonstrated the feasibility of this technique to achieve comprehensive 3D evaluation of the mechanical responses of the posterior eye, which may provide mechanistic insights into the regional susceptibility in glaucoma.


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